ENSGALG00000012048


Gallus gallus

Features
Gene ID: ENSGALG00000012048
  
Biological name :LARP7
  
Synonyms : La ribonucleoprotein domain family member 7 / LARP7
  
Possible biological names infered from orthology : Gm12666 / La-related protein 7 / Q05CL8 / Q4G0J3
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 57442713
Gene end: 57470335
  
Corresponding Affymetrix probe sets: GgaAffx.12803.1.S1_s_at (Chicken Array)   GgaAffx.7637.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019653
NCBI entrez gene - 422690     See in Manteia.
RefSeq - XM_004935946
RefSeq - XM_420643
swissprot - E1BQG3
Ensembl - ENSGALG00000012048
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 larp7ENSDARG00000017315Danio rerio
 LARP7ENSG00000174720Homo sapiens
 Gm12666ENSMUSG00000066107Mus musculus
 Larp7ENSMUSG00000027968Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LARP6 / La ribonucleoprotein domain family member 6 / Q8BN59* / Q9BRS8* / La-related protein 6 *ENSGALG0000000404614
LARP6L / Gallus gallus La ribonucleoprotein domain family member 6-like (LARP6L), mRNA.ENSGALG0000004497012


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002344  Lupus La protein
 IPR006630  La-type HTH domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR014886  La protein, RNA-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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