ENSGALG00000044970


Gallus gallus

Features
Gene ID: ENSGALG00000044970
  
Biological name :LARP6L
  
Synonyms : Gallus gallus La ribonucleoprotein domain family member 6-like (LARP6L), mRNA. / LARP6L
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 1570440
Gene end: 1573381
  
Corresponding Affymetrix probe sets: Gga.14900.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058966
NCBI entrez gene - 420093     See in Manteia.
RefSeq - NM_001326492
RefSeq - XM_418213
RefSeq Peptide - NP_001313421
swissprot - A0A1L1RJP2
Ensembl - ENSGALG00000044970
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 larp6bENSDARG00000003968Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LARP6 / La ribonucleoprotein domain family member 6 / Q8BN59* / Q9BRS8* / La-related protein 6 *ENSGALG0000000404631
LARP7 / La ribonucleoprotein domain family member 7 / Q05CL8* / Q4G0J3* / Gm12666* / La-related protein 7 *ENSGALG0000001204818


Protein motifs (from Interpro)
Interpro ID Name
 IPR002344  Lupus La protein
 IPR006630  La-type HTH domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR024642  SUZ-C domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr