ENSG00000177666


Homo sapiens

Features
Gene ID: ENSG00000177666
  
Biological name :PNPLA2
  
Synonyms : patatin like phospholipase domain containing 2 / PNPLA2 / Q96AD5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: p15.5
Gene start: 818902
Gene end: 825573
  
Corresponding Affymetrix probe sets: 212705_x_at (Human Genome U133 Plus 2.0 Array)   39854_r_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000337701
NCBI entrez gene - 57104     See in Manteia.
OMIM - 609059
RefSeq - XM_017018028
RefSeq - NM_020376
RefSeq - XM_006718265
RefSeq - XM_006718266
RefSeq Peptide - NP_065109
swissprot - Q96AD5
Ensembl - ENSG00000177666
  
Related genetic diseases (OMIM): 610717 - Neutral lipid storage disease with myopathy, 610717
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pnpla2ENSDARG00000089390Danio rerio
 PNPLA2ENSGALG00000014569Gallus gallus
 Pnpla2ENSMUSG00000025509Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PNPLA3 / Q9NST1 / patatin like phospholipase domain containing 3ENSG0000010034437
PNPLA5 / Q7Z6Z6 / patatin like phospholipase domain containing 5ENSG0000010034131
PNPLA1 / Q8N8W4 / patatin like phospholipase domain containing 1ENSG0000018031627
P41247 / PNPLA4 / patatin like phospholipase domain containing 4ENSG0000000675718


Protein motifs (from Interpro)
Interpro ID Name
 IPR002641  Patatin-like phospholipase domain
 IPR016035  Acyl transferase/acyl hydrolase/lysophospholipase
 IPR033562  Patatin-like phospholipase domain-containing protein
 IPR033903  Patatin-like phospholipase domain-containing protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0010891 negative regulation of sequestering of triglyceride IEA
 biological_processGO:0010898 positive regulation of triglyceride catabolic process IDA
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0019433 triglyceride catabolic process IEA
 biological_processGO:0019915 lipid storage IEA
 biological_processGO:0034389 lipid particle organization IEA
 biological_processGO:0036155 acylglycerol acyl-chain remodeling TAS
 biological_processGO:0043687 post-translational protein modification TAS
 biological_processGO:0044242 cellular lipid catabolic process IEA
 biological_processGO:0044267 cellular protein metabolic process TAS
 biological_processGO:0055088 lipid homeostasis IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005811 lipid droplet IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004465 lipoprotein lipase activity TAS
 molecular_functionGO:0004806 triglyceride lipase activity TAS
 molecular_functionGO:0016411 acylglycerol O-acyltransferase activity TAS
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Acyl chain remodeling of DAG and TAG
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000467 Neck muscle weakness 
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 HP:0000819 Diabetes mellitus 
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001397 Hepatic steatosis 
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 HP:0001638 Cardiomyopathy 
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 HP:0002155 Hypertriglyceridemia 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002355 Difficulty walking 
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 HP:0002380 Fasciculations "Fasciculations are observed as small, local, involuntary muscle contractions (twitching) visible under the skin. Fasciculations result from increased irritability of an axon (which in turn is often a manifestation of disease of a motor neuron). This leads to sporadic discharges of all the muscle fibers controlled by the axon in isolation from other motor units." [HPO:curators]
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003198 Myopathy 
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003388 Easy fatigability 
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003546 Exercise intolerance 
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 HP:0003581 Onset in adulthood 
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 HP:0003677 Slow progression 
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003828 Variable expressivity 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0009046 Difficulty walking, running, climbing stairs 
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 HP:0009058 Lipid accumulation in skeletal muscle "An abnormal accumulation of lipids in skeletal muscle." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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