ENSG00000180532


Homo sapiens

Features
Gene ID: ENSG00000180532
  
Biological name :ZSCAN4
  
Synonyms : Q8NAM6 / zinc finger and SCAN domain containing 4 / ZSCAN4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.43
Gene start: 57668935
Gene end: 57679152
  
Corresponding Affymetrix probe sets: 1552851_at (Human Genome U133 Plus 2.0 Array)   1552852_a_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000321963
Ensembl peptide - ENSP00000480210
NCBI entrez gene - 201516     See in Manteia.
OMIM - 613419
RefSeq - XM_017026458
RefSeq - NM_152677
RefSeq - XM_011526607
RefSeq Peptide - NP_689890
swissprot - Q8NAM6
Ensembl - ENSG00000180532
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A7KBS4ENSMUSG00000090714Mus musculus
 Q3URS2ENSMUSG00000070828Mus musculus
 Q80VJ6ENSMUSG00000054272Mus musculus
 Zscan4bENSMUSG00000095339Mus musculus
 Zscan4eENSMUSG00000095936Mus musculus
 Zscan4-ps1ENSMUSG00000110103Mus musculus
 Zscan4-ps2ENSMUSG00000110190Mus musculus
 Zscan4-ps3ENSMUSG00000109969Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010833 telomere maintenance via telomere lengthening ISS
 biological_processGO:0045950 negative regulation of mitotic recombination ISS
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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