ENSMUSG00000090714


Mus musculus

Features
Gene ID: ENSMUSG00000090714
  
Biological name :Zscan4d
  
Synonyms : A7KBS4 / zinc finger and SCAN domain containing 4D / Zscan4d
  
Possible biological names infered from orthology : Q8NAM6 / zinc finger and SCAN domain containing 4 / ZSCAN4
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: A1
Gene start: 11161374
Gene end: 11166159
  
Corresponding Affymetrix probe sets: 10549964 (MoGene1.0st)   10549972 (MoGene1.0st)   10559978 (MoGene1.0st)   1457033_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000066504
NCBI entrez gene - 545913     See in Manteia.
MGI - MGI:3645954
RefSeq - NM_001100186
RefSeq - XM_006540208
RefSeq Peptide - NP_001093656
swissprot - A7KBS4
Ensembl - ENSMUSG00000090714
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8NAM6ENSG00000180532Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q80VJ6 / Zscan4c / zinc finger and SCAN domain containing 4C / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000005427295
Zscan4-ps1 / zinc finger and SCAN domain containing 4, pseudogene 1 / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000011010395
Zscan4-ps2 / zinc finger and SCAN domain containing 4, pseudogene 2 / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000011019094
Q3URS2 / Zscan4f / zinc finger and SCAN domain containing 4F / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000007082894
Zscan4e / zinc finger and SCAN domain containing 4E / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000009593693
Zscan4-ps3 / zinc finger and SCAN domain containing 4, pseudogene 3 / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000010996993
Zscan4b / zinc finger and SCAN domain containing 4B / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000009533992


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010833 telomere maintenance via telomere lengthening ISS
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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