ENSMUSG00000070828


Mus musculus

Features
Gene ID: ENSMUSG00000070828
  
Biological name :Zscan4f
  
Synonyms : Q3URS2 / zinc finger and SCAN domain containing 4F / Zscan4f
  
Possible biological names infered from orthology : Q8NAM6 / zinc finger and SCAN domain containing 4 / ZSCAN4
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: A1
Gene start: 11397915
Gene end: 11402318
  
Corresponding Affymetrix probe sets: 10549964 (MoGene1.0st)   10549972 (MoGene1.0st)   10559978 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000120149
Ensembl peptide - ENSMUSP00000122083
NCBI entrez gene - 665902     See in Manteia.
MGI - MGI:3708485
RefSeq - NM_001110316
RefSeq Peptide - NP_001103786
swissprot - L7N266
swissprot - Q3URS2
Ensembl - ENSMUSG00000070828
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8NAM6ENSG00000180532Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zscan4-ps2 / zinc finger and SCAN domain containing 4, pseudogene 2 / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000011019099
Q80VJ6 / Zscan4c / zinc finger and SCAN domain containing 4C / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000005427299
Zscan4-ps3 / zinc finger and SCAN domain containing 4, pseudogene 3 / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000010996998
Zscan4e / zinc finger and SCAN domain containing 4E / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000009593695
Zscan4b / zinc finger and SCAN domain containing 4B / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000009533995
Zscan4-ps1 / zinc finger and SCAN domain containing 4, pseudogene 1 / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000011010395
A7KBS4 / Zscan4d / zinc finger and SCAN domain containing 4D / Q8NAM6* / ZSCAN4* / zinc finger and SCAN domain containing 4*ENSMUSG0000009071494


Protein motifs (from Interpro)
Interpro ID Name
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010833 telomere maintenance via telomere lengthening ISS
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr