ENSG00000183421


Homo sapiens

Features
Gene ID: ENSG00000183421
  
Biological name :RIPK4
  
Synonyms : P57078 / receptor interacting serine/threonine kinase 4 / RIPK4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 21
Strand: -1
Band: q22.3
Gene start: 41739369
Gene end: 41767106
  
Corresponding Affymetrix probe sets: 221215_s_at (Human Genome U133 Plus 2.0 Array)   234730_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000332454
Ensembl peptide - ENSP00000330161
NCBI entrez gene - 54101     See in Manteia.
OMIM - 605706
RefSeq - NM_020639
RefSeq Peptide - NP_065690
swissprot - P57078
Ensembl - ENSG00000183421
  
Related genetic diseases (OMIM): 263650 - Popliteal pterygium syndrome, Bartsocas-Papas type, 263650
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ripk4ENSDARG00000043211Danio rerio
 RIPK4ENSGALG00000040189Gallus gallus
 Ripk4ENSMUSG00000005251Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ANKK1 / Q8NFD2 / ankyrin repeat and kinase domain containing 1ENSG0000017020936
RIPK2 / O43353 / receptor interacting serine/threonine kinase 2ENSG0000010431219
RIPK1 / Q13546 / receptor interacting serine/threonine kinase 1ENSG0000013727518
RIPK3 / Q9Y572 / receptor interacting serine/threonine kinase 3ENSG0000012946515


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR002110  Ankyrin repeat
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site
 IPR020683  Ankyrin repeat-containing domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002009 morphogenesis of an epithelium IMP
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IMP
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000050 Hypoplastic genitalia 
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 HP:0000059 Hypoplastic labia majora 
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 HP:0000062 Ambiguous genitalia 
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000161 Median cleft lip "A type of `cleft lip` (HP:0000204) presenting as a midline (median) gap in the upper lip." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000378 Cup-shaped ears "Small auricles that grow forward over the meatus (ear canal)." [HPO:curators]
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000561 Absent eyelashes "Lack of eyelashes." [HPO:curators]
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000625 Eyelid, cleft "A short discontinuity of the margin of the lower or upper eyelid." [pmid:19125427]
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 HP:0000882 Hypoplastic scapulae 
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 HP:0001159 Syndactyly "Webbing or fusion of the fingers or toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers or toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001770 Toe syndactyly "Webbing or fusion of the toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001792 Nail hypoplasia "Underdeveloped `fingernails` (FMA:54327) or `toenails` (FMA:54328)." [HPO:probinson]
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 HP:0001798 Anonychia "Total absence of nails." [HPO:curators]
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 HP:0001800 Hypoplastic toenails "Underdeveloped toenails." [HPO:curators]
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 HP:0001883 Talipes 
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 HP:0002006 Facial cleft 
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 HP:0002025 Anal stenosis "Abnormal narrowing of the anal opening." [HPO:curators]
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 HP:0002223 Absent eyebrows 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006610 Wide intermamillary distance 
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 HP:0007418 Alopecia totalis 
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 HP:0007759 Corneal opacities, not impairing visual acuity 
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 HP:0007957 Variable degree of corneal opacities 
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 HP:0008678 Renal hypoplasia/aplasia 
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 HP:0008689 Bilateral cryptorchidism 
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 HP:0009755 Ankyloblepharon "Adhesion of the ciliary edges of the eyelids to each other." [HPO:curators]
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 HP:0009756 Popliteal pterygium "A pterygium (or pterygia) occuring in the popliteal region (the back of the knee)." [HPO:curators]
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 HP:0009777 Aplasia of the thumb "Absent thumb." [HPO:curators]
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 HP:0009803 Hypoplastic/small phalanges of the hand 
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 HP:0010185 Aplasia/Hypoplasia of the distal phalanges of the toes 
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0100240 Synostosis of joints 
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 HP:0100840 Aplasia/Hypoplasia of the eyebrow "Absence or underdevelopment of the eyebrow." [HPO:probinson]
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 HP:0200102 Sparse/absent eyelashes 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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