ENSG00000183751


Homo sapiens

Features
Gene ID: ENSG00000183751
  
Biological name :TBL3
  
Synonyms : Q12788 / TBL3 / transducin beta like 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.3
Gene start: 1972037
Gene end: 1982933
  
Corresponding Affymetrix probe sets: 1564683_at (Human Genome U133 Plus 2.0 Array)   209820_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000454735
Ensembl peptide - ENSP00000481995
Ensembl peptide - ENSP00000454836
Ensembl peptide - ENSP00000331815
NCBI entrez gene - 10607     See in Manteia.
OMIM - 605915
RefSeq - NM_006453
RefSeq Peptide - NP_006444
swissprot - Q12788
swissprot - J3KNP2
swissprot - H3BN88
swissprot - A0A087WYP7
Ensembl - ENSG00000183751
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbl3ENSDARG00000052344Danio rerio
 TBL3ENSGALG00000005558Gallus gallus
 Tbl3ENSMUSG00000040688Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SMU1 / Q2TAY7 / SMU1, DNA replication regulator and spliceosomal factorENSG0000012269213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011044  Quinoprotein amine dehydrogenase, beta chain-like
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR013934  Small-subunit processome, Utp13
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0032040 small-subunit processome IEA
 cellular_componentGO:0034388 Pwp2p-containing subcomplex of 90S preribosome IBA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030515 snoRNA binding IBA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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