ENSG00000122692


Homo sapiens

Features
Gene ID: ENSG00000122692
  
Biological name :SMU1
  
Synonyms : Q2TAY7 / SMU1 / SMU1, DNA replication regulator and spliceosomal factor
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: p21.1
Gene start: 33041764
Gene end: 33076659
  
Corresponding Affymetrix probe sets: 218393_s_at (Human Genome U133 Plus 2.0 Array)   222618_at (Human Genome U133 Plus 2.0 Array)   233946_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000380336
NCBI entrez gene - 55234     See in Manteia.
OMIM - 617811
RefSeq - XM_005251503
RefSeq - NM_018225
RefSeq Peptide - NP_060695
swissprot - Q2TAY7
swissprot - A0MNN4
Ensembl - ENSG00000122692
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smu1aENSDARG00000002538Danio rerio
 smu1bENSDARG00000051970Danio rerio
 SMU1ENSGALG00000002014Gallus gallus
 Smu1ENSMUSG00000028409Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBL3 / Q12788 / transducin beta like 3ENSG0000018375120


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR006594  LIS1 homology motif
 IPR006595  CTLH, C-terminal LisH motif
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome ISS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016607 nuclear speck ISS
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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