ENSMUSG00000040688


Mus musculus

Features
Gene ID: ENSMUSG00000040688
  
Biological name :Tbl3
  
Synonyms : Q8C4J7 / Tbl3 / Transducin beta-like protein 3
  
Possible biological names infered from orthology : Q12788 / transducin beta like 3
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: A3.3
Gene start: 24697949
Gene end: 24707660
  
Corresponding Affymetrix probe sets: 10448707 (MoGene1.0st)   10338144 (MoGene1.0st)   10338231 (MoGene1.0st)   10338348 (MoGene1.0st)   10338371 (MoGene1.0st)   10338374 (MoGene1.0st)   10338519 (MoGene1.0st)   10338615 (MoGene1.0st)   10338644 (MoGene1.0st)   10338761 (MoGene1.0st)   10339237 (MoGene1.0st)   10339802 (MoGene1.0st)   10339957 (MoGene1.0st)   10340492 (MoGene1.0st)   10340581 (MoGene1.0st)   10340821 (MoGene1.0st)   10340853 (MoGene1.0st)   10341135 (MoGene1.0st)   10342612 (MoGene1.0st)   10342629 (MoGene1.0st)   10342655 (MoGene1.0st)   10343018 (MoGene1.0st)   10343788 (MoGene1.0st)   10343841 (MoGene1.0st)   10338408 (MoGene1.0st)   10340519 (MoGene1.0st)   10343878 (MoGene1.0st)   10344027 (MoGene1.0st)   10344206 (MoGene1.0st)   1415750_at (Mouse Genome 430 2.0 Array)   1447660_at (Mouse Genome 430 2.0 Array)   1447782_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117818
Ensembl peptide - ENSMUSP00000120911
NCBI entrez gene - 213773     See in Manteia.
MGI - MGI:2384863
RefSeq - NM_145396
RefSeq Peptide - NP_663371
swissprot - F6YAR3
swissprot - Q8C4J7
Ensembl - ENSMUSG00000040688
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbl3ENSDARG00000052344Danio rerio
 TBL3ENSGALG00000005558Gallus gallus
 TBL3ENSG00000183751Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Smu1 / Q3UKJ7 / WD40 repeat-containing protein SMU1 WD40 repeat-containing protein SMU1, N-terminally processed / Q2TAY7* / SMU1, DNA replication regulator and spliceosomal factor*ENSMUSG0000002840912


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013934  Small-subunit processome, Utp13
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0032040 small-subunit processome IEA
 cellular_componentGO:0034388 Pwp2p-containing subcomplex of 90S preribosome IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030515 snoRNA binding IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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