ENSG00000185728


Homo sapiens

Features
Gene ID: ENSG00000185728
  
Biological name :YTHDF3
  
Synonyms : Q7Z739 / YTHDF3 / YTH N6-methyladenosine RNA binding protein 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q12.3
Gene start: 63168553
Gene end: 63212786
  
Corresponding Affymetrix probe sets: 1564053_a_at (Human Genome U133 Plus 2.0 Array)   221749_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000478490
Ensembl peptide - ENSP00000485046
Ensembl peptide - ENSP00000483659
Ensembl peptide - ENSP00000483580
Ensembl peptide - ENSP00000483267
Ensembl peptide - ENSP00000481497
Ensembl peptide - ENSP00000481476
Ensembl peptide - ENSP00000480086
Ensembl peptide - ENSP00000478825
Ensembl peptide - ENSP00000473496
Ensembl peptide - ENSP00000473986
Ensembl peptide - ENSP00000478356
Ensembl peptide - ENSP00000478398
NCBI entrez gene - 253943     See in Manteia.
RefSeq - XM_011517510
RefSeq - NM_001277813
RefSeq - NM_001277814
RefSeq - NM_001277815
RefSeq - NM_001277816
RefSeq - NM_001277817
RefSeq - NM_001277818
RefSeq - NM_152758
RefSeq - XM_011517509
RefSeq Peptide - NP_001264745
RefSeq Peptide - NP_001264747
RefSeq Peptide - NP_689971
RefSeq Peptide - NP_001264742
RefSeq Peptide - NP_001264743
RefSeq Peptide - NP_001264744
RefSeq Peptide - NP_001264746
swissprot - A0A087WU40
swissprot - A0A024R7W5
swissprot - A0A087X0Q1
swissprot - A0A087X0C3
swissprot - A0A087WY31
swissprot - A0A087WWB0
swissprot - Q7Z739
swissprot - S4R373
swissprot - A0A087X0U5
swissprot - A0A087WU63
Ensembl - ENSG00000185728
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ythdf3ENSDARG00000057939Danio rerio
 YTHDF3ENSGALG00000039774Gallus gallus
 Q8BYK6ENSMUSG00000047213Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9BYJ9 / YTHDF1 / YTH N6-methyladenosine RNA binding protein 1ENSG0000014965864
Q9Y5A9 / YTHDF2 / YTH N6-methyladenosine RNA binding protein 2ENSG0000019849264


Protein motifs (from Interpro)
Interpro ID Name
 IPR007275  YTH domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045727 positive regulation of translation IMP
 biological_processGO:0045948 positive regulation of translational initiation IDA
 biological_processGO:0061157 mRNA destabilization IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043022 ribosome binding IDA
 molecular_functionGO:1990247 N6-methyladenosine-containing RNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr