ENSG00000149658


Homo sapiens

Features
Gene ID: ENSG00000149658
  
Biological name :YTHDF1
  
Synonyms : Q9BYJ9 / YTHDF1 / YTH N6-methyladenosine RNA binding protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: q13.33
Gene start: 63195429
Gene end: 63216234
  
Corresponding Affymetrix probe sets: 221741_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359359
Ensembl peptide - ENSP00000359364
NCBI entrez gene - 54915     See in Manteia.
OMIM - 616529
RefSeq - NM_017798
RefSeq Peptide - NP_060268
swissprot - Q5JXC6
swissprot - Q9BYJ9
Ensembl - ENSG00000149658
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ythdf1ENSDARG00000016447Danio rerio
 YTHDF1ENSGALG00000005745Gallus gallus
 P59326ENSMUSG00000038848Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7Z739 / YTHDF3 / YTH N6-methyladenosine RNA binding protein 3ENSG0000018572868
Q9Y5A9 / YTHDF2 / YTH N6-methyladenosine RNA binding protein 2ENSG0000019849266


Protein motifs (from Interpro)
Interpro ID Name
 IPR007275  YTH domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045727 positive regulation of translation IMP
 biological_processGO:0045948 positive regulation of translational initiation IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043022 ribosome binding IDA
 molecular_functionGO:1990247 N6-methyladenosine-containing RNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr