ENSMUSG00000038848


Mus musculus

Features
Gene ID: ENSMUSG00000038848
  
Biological name :Ythdf1
  
Synonyms : P59326 / Ythdf1 / YTH domain family 1
  
Possible biological names infered from orthology : Q9BYJ9 / YTH N6-methyladenosine RNA binding protein 1
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: H4
Gene start: 180904377
Gene end: 180920949
  
Corresponding Affymetrix probe sets: 10490544 (MoGene1.0st)   10339580 (MoGene1.0st)   10340279 (MoGene1.0st)   10341644 (MoGene1.0st)   10342166 (MoGene1.0st)   10343156 (MoGene1.0st)   10343473 (MoGene1.0st)   10343698 (MoGene1.0st)   10343970 (MoGene1.0st)   1415767_at (Mouse Genome 430 2.0 Array)   1437102_at (Mouse Genome 430 2.0 Array)   1437456_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000037808
Ensembl peptide - ENSMUSP00000116665
Ensembl peptide - ENSMUSP00000104504
NCBI entrez gene - 228994     See in Manteia.
MGI - MGI:1917431
RefSeq - NM_173761
RefSeq Peptide - NP_776122
swissprot - A2AWN8
swissprot - A2AWN7
swissprot - P59326
Ensembl - ENSMUSG00000038848
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ythdf1ENSDARG00000016447Danio rerio
 YTHDF1ENSGALG00000005745Gallus gallus
 Q9BYJ9ENSG00000149658Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BYK6 / Ythdf3 / YTH domain family 3 / Q7Z739* / YTH N6-methyladenosine RNA binding protein 3*ENSMUSG0000004721370
Q91YT7 / Ythdf2 / YTH domain family 2 / Q9Y5A9* / YTH N6-methyladenosine RNA binding protein 2*ENSMUSG0000004002567


Protein motifs (from Interpro)
Interpro ID Name
 IPR007275  YTH domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045727 positive regulation of translation IEA
 biological_processGO:0045948 positive regulation of translational initiation IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0043022 ribosome binding IEA
 molecular_functionGO:1990247 N6-methyladenosine-containing RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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