ENSG00000185963


Homo sapiens

Features
Gene ID: ENSG00000185963
  
Biological name :BICD2
  
Synonyms : BICD2 / BICD cargo adaptor 2 / Q8TD16
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q22.31
Gene start: 92711363
Gene end: 92764812
  
Corresponding Affymetrix probe sets: 1553021_s_at (Human Genome U133 Plus 2.0 Array)   209203_s_at (Human Genome U133 Plus 2.0 Array)   212702_s_at (Human Genome U133 Plus 2.0 Array)   213154_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000349351
Ensembl peptide - ENSP00000364662
NCBI entrez gene - 23299     See in Manteia.
OMIM - 609797
RefSeq - XM_017014551
RefSeq - NM_001003800
RefSeq - NM_015250
RefSeq Peptide - NP_056065
RefSeq Peptide - NP_001003800
swissprot - Q8TD16
Ensembl - ENSG00000185963
  
Related genetic diseases (OMIM): 615290 - Spinal muscular atrophy, lower extremity-predominant, 2, AD, 615290
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bicd2ENSDARG00000075571Danio rerio
 CU914536.1ENSDARG00000098215Danio rerio
 BICD2ENSGALG00000005249Gallus gallus
 Bicd2ENSMUSG00000037933Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BICD1 / Q96G01 / BICD cargo adaptor 1ENSG0000015174662


Protein motifs (from Interpro)
Interpro ID Name
 IPR018477  Bicaudal-D protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER IMP
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0034067 protein localization to Golgi apparatus IMP
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0051642 centrosome localization IMP
 biological_processGO:0070507 regulation of microtubule cytoskeleton organization IGI
 biological_processGO:0072385 minus-end-directed organelle transport along microtubule ISS
 biological_processGO:0072393 microtubule anchoring at microtubule organizing center ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005642 annulate lamellae IDA
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0005737 cytoplasm IMP
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005813 centrosome IMP
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0031410 cytoplasmic vesicle ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008093 cytoskeletal adaptor activity IEA
 molecular_functionGO:0017137 Rab GTPase binding ISS
 molecular_functionGO:0034452 dynactin binding ISS
 molecular_functionGO:0051959 dynein light intermediate chain binding IEA
 molecular_functionGO:0070840 dynein complex binding ISS


Pathways (from Reactome)
Pathway description
COPI-independent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001284 Areflexia 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001385 Hip dysplasia 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001771 Achilles tendon contractures 
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 HP:0002380 Fasciculations "Fasciculations are observed as small, local, involuntary muscle contractions (twitching) visible under the skin. Fasciculations result from increased irritability of an axon (which in turn is often a manifestation of disease of a motor neuron). This leads to sporadic discharges of all the muscle fibers controlled by the axon in isolation from other motor units." [HPO:curators]
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 HP:0002515 Waddling gait 
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 HP:0003273 Hip contractures 
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 HP:0003307 Hyperlordosis 
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 HP:0003327 Axial muscle weakness "Reduced strength of the axial musculature (i.e., of the muscles of the head and neck, spine, and ribs)." [HPO:curators]
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003691 Scapular winging 
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 HP:0003828 Variable expressivity 
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 HP:0006380 Knee flexion deformities 
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 HP:0007269 Spinal muscular atrophy "Muscular weakness and atrophy related to loss of the motor neurons of the spinal cord and brainstem." [HPO:curators]
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 HP:0009046 Difficulty walking, running, climbing stairs 
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 HP:0040083 Toe walking 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000185963 BICD2 / Q8TD16 / BICD cargo adaptor 2  / complex






 

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