ENSG00000187240


Homo sapiens

Features
Gene ID: ENSG00000187240
  
Biological name :DYNC2H1
  
Synonyms : DYNC2H1 / dynein cytoplasmic 2 heavy chain 1 / Q8NCM8
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q22.3
Gene start: 103109431
Gene end: 103479863
  
Corresponding Affymetrix probe sets: 1561939_at (Human Genome U133 Plus 2.0 Array)   1565149_at (Human Genome U133 Plus 2.0 Array)   219469_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000364887
Ensembl peptide - ENSP00000433451
Ensembl peptide - ENSP00000436736
Ensembl peptide - ENSP00000334021
Ensembl peptide - ENSP00000381167
NCBI entrez gene - 79659     See in Manteia.
OMIM - 603297
RefSeq - XM_017018292
RefSeq - NM_001080463
RefSeq - NM_001377
RefSeq - XM_006718903
RefSeq - XM_017018291
RefSeq Peptide - NP_001368
RefSeq Peptide - NP_001073932
swissprot - H0YEX1
swissprot - Q8NCM8
swissprot - H0YDE0
Ensembl - ENSG00000187240
  
Related genetic diseases (OMIM): 613091 - Short-rib thoracic dysplasia 3 with or without polydactyly, 613091
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01072607.1ENSDARG00000113761Danio rerio
 Q45VK7ENSMUSG00000047193Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DNAH10 / Q8IVF4 / dynein axonemal heavy chain 10ENSG0000019765323
DNAH9 / Q9NYC9 / dynein axonemal heavy chain 9ENSG0000000717423
DNAH5 / Q8TE73 / dynein axonemal heavy chain 5ENSG0000003913922
DNAH3 / Q8TD57 / dynein axonemal heavy chain 3ENSG0000015848621
DNHD1 / Q96M86 / dynein heavy chain domain 1ENSG0000017953216


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR004273  Dynein heavy chain domain
 IPR011704  ATPase, dynein-related, AAA domain
 IPR013594  Dynein heavy chain, domain-1
 IPR013602  Dynein heavy chain, domain-2
 IPR024317  Dynein heavy chain, AAA module D4
 IPR024743  Dynein heavy chain, coiled coil stalk
 IPR026815  Cytoplasmic dynein 2 heavy chain 1
 IPR026983  Dynein heavy chain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035699  Dynein heavy chain, hydrolytic ATP-binding dynein motor region D1
 IPR035706  Dynein heavy chain, ATP-binding dynein motor region D5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0007030 Golgi organization IDA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0016485 protein processing IEA
 biological_processGO:0021522 spinal cord motor neuron differentiation IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0030900 forebrain development IEA
 biological_processGO:0035721 intraciliary retrograde transport IEA
 biological_processGO:0035735 intraciliary transport involved in cilium assembly TAS
 biological_processGO:0045880 positive regulation of smoothened signaling pathway IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0060976 coronary vasculature development IEA
 biological_processGO:0061512 protein localization to cilium IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005868 cytoplasmic dynein complex IDA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005929 cilium TAS
 cellular_componentGO:0005930 axoneme IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030286 dynein complex IEA
 cellular_componentGO:0031514 motile cilium IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0045177 apical part of cell IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0097542 ciliary tip TAS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003774 motor activity NAS
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008569 ATP-dependent microtubule motor activity, minus-end-directed IDA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0045503 dynein light chain binding IBA
 molecular_functionGO:0045505 dynein intermediate chain binding IBA
 molecular_functionGO:0051959 dynein light intermediate chain binding IBA


Pathways (from Reactome)
Pathway description
Hedgehog off state
Intraflagellar transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000062 Ambiguous genitalia 
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 HP:0000083 Renal failure 
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 HP:0000089 Renal hypoplasia 
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 HP:0000090 Nephronophthisis 
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 HP:0000107 Renal cysts 
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 HP:0000112 Nephropathy "A nonspecific term referring to disease or damage of the kidneys." [HPO:curators]
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 HP:0000126 Hydronephrosis 
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000445 Broad nose 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000766 Abnormality of the sternum 
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 HP:0000772 Abnormality of the ribs 
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 HP:0000773 Short ribs 
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 HP:0000774 Narrow chest 
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 HP:0000889 Abnormality of the clavicles "Any abnormality of the clavicles (collar bones)." [HPO:curators]
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 HP:0000944 Abnormality of the metaphyses 
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 HP:0001156 Brachydactyly 
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 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
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 HP:0001177 Preaxial polydactyly (hands) "Supernumerary digits located at the radial side of the hand. Polydactyly (supernumerary digits) involving the thumb occurs in many distinct forms of high variability and severity. Ranging from fleshy nubbins over varying degrees of partial duplication/splitting to completely duplicated or even triplicated thumbs or preaxial (on the radial side of the hand) supernumerary digits." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001305 Dandy-Walker malformation "A congenital brain malformation typically characterized by incomplete formation of the cerebellar vermis, dilation of the fourth ventricle, and enlargement of the posterior fossa. In layman s terms, Dandy Walker malformation is a cyst in the cerebellum (typically symmetrical) that is involved with the fourth ventricle. This may interfere with the body s ability to drain cerebrospinal fluid from the brain, resulting in hydrocephalus. Dandy Walker cysts are formed during early embryonic development, while the brain forms. The cyst in the cerebellum typically has several blood vessels running through it connecting to the brain, thereby prohibiting surgical removal." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001392 Abnormality of the liver 
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 HP:0001539 Omphalocele 
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 HP:0001770 Toe syndactyly "Webbing or fusion of the toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0001789 Hydrops fetalis 
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 HP:0001830 Postaxial polydactyly (feet) "Polydactyly of the foot most commonly refers to the presence of six toes on one foot. Postaxial polydactyly affects the lateral ray and the duplication may range from a well-formed articulated digit to a rudimentary digit." [HPO:curators]
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 HP:0002006 Facial cleft 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0002032 Esophageal atresia "A developmental defect resulting in complete obliteration of the lumen of the esophagus such that the esophagus ends in a blind pouch rather than connecting to the stomach." [HPO:curators]
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002612 Congenital hepatic fibrosis 
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 HP:0002644 Abnormality of the pelvis "An abnormality of the bony pelvis (pelvic girdle); which is a ring of bones connecting the vertebral column to the femurs." [HPO:curators]
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 HP:0002652 Skeletal dysplasia 
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 HP:0002983 Micromelia 
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0003762 Uterus didelphys 
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 HP:0004279 Hypoplastic hand 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004397 Ectopic anus "Abnormal displacement or malposition of the anus." [HPO:curators]
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 HP:0004599 Absent or minimally ossified vertebral bodies 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005716 Lethal skeletal dysplasia 
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 HP:0006703 Aplasia/Hypoplasia of the lungs 
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 HP:0007703 Abnormal retinal pigmentation 
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 HP:0008716 Urethrovaginal fistulae 
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 HP:0008736 Hypoplasia of penis 
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 HP:0008872 Feeding problems in infancy 
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 HP:0008873 Short stature, disproportionate short-limbed "A type of short stature characterized by a short limbs but an average-sized trunk." [HPO:curators]
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 HP:0009106 Abnormal ossification involving the bones of the pelvis 
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 HP:0010297 Bifid tongue "Tongue with a median apical indentation or fork." [pmid:19125428]
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 HP:0010306 Short thorax "Reduced inferior to superior extent of the thorax." [HPO:curators]
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 HP:0010564 Bifid epiglottis "A midline anterior-posterior cleft of the epiglottis that involves at least two-thirds of the epiglottic leaf. It is a useful feature for clinical diagnosis because it appears to be very rare in syndromes other than Pallister-Hall-Syndrome and is also rare as an isolated malformation." [HPO:curators]
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 HP:0010579 Cone-shaped epiphyses 
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000187240 Q8NCM8 / DYNC2H1 / dynein cytoplasmic 2 heavy chain 1  / complex






 

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