ENSG00000187325


Homo sapiens

Features
Gene ID: ENSG00000187325
  
Biological name :TAF9B
  
Synonyms : Q9HBM6 / TAF9B / TATA-box binding protein associated factor 9b
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q21.1
Gene start: 78129748
Gene end: 78139706
  
Corresponding Affymetrix probe sets: 221616_s_at (Human Genome U133 Plus 2.0 Array)   221617_at (Human Genome U133 Plus 2.0 Array)   221618_s_at (Human Genome U133 Plus 2.0 Array)   226037_s_at (Human Genome U133 Plus 2.0 Array)   228483_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000339917
NCBI entrez gene - 51616     See in Manteia.
OMIM - 300754
RefSeq - NM_015975
RefSeq Peptide - NP_057059
swissprot - Q9HBM6
Ensembl - ENSG00000187325
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf9ENSDARG00000077870Danio rerio
 TAF9ENSGALG00000004187Gallus gallus
 Taf9bENSMUSG00000047242Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAF9 / Q16594 / TATA-box binding protein associated factor 9ENSG0000027384182


Protein motifs (from Interpro)
Interpro ID Name
 IPR003162  Transcription initiation factor TAFII31
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter TAS
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter TAS
 biological_processGO:0016579 protein deubiquitination TAS
 biological_processGO:0030307 positive regulation of cell growth IMP
 biological_processGO:0043066 negative regulation of apoptotic process IMP
 biological_processGO:0043966 histone H3 acetylation IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0050821 protein stabilization IDA
 biological_processGO:0051123 RNA polymerase II transcriptional preinitiation complex assembly IEA
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator TAS
 biological_processGO:1902166 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IC
 cellular_componentGO:0000124 SAGA complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005669 transcription factor TFIID complex IDA
 cellular_componentGO:0033276 transcription factor TFTC complex IDA
 molecular_functionGO:0001075 transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly IBA
 molecular_functionGO:0003714 transcription corepressor activity IC
 molecular_functionGO:0004402 histone acetyltransferase activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity TAS
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
HIV Transcription Initiation
RNA Polymerase II HIV Promoter Escape
Transcription of the HIV genome
Ub-specific processing proteases
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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