ENSG00000187475


Homo sapiens

Features
Gene ID: ENSG00000187475
  
Biological name :HIST1H1T
  
Synonyms : HIST1H1T / histone cluster 1 H1 family member t / P22492
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p22.2
Gene start: 26107419
Gene end: 26108136
  
Corresponding Affymetrix probe sets: 1553568_a_at (Human Genome U133 Plus 2.0 Array)   207982_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000341214
NCBI entrez gene - 3010     See in Manteia.
OMIM - 142712
RefSeq - NM_005323
RefSeq Peptide - NP_005314
swissprot - P22492
Ensembl - ENSG00000187475
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 histh1lENSDARG00000035519Danio rerio
 si:ch1073-153i20.4ENSDARG00000105350Danio rerio
 si:ch1073-159d7.7ENSDARG00000074012Danio rerio
 si:ch211-103n10.5ENSDARG00000077504Danio rerio
 si:ch211-113a14.18ENSDARG00000051735Danio rerio
 si:ch211-113a14.24ENSDARG00000051718Danio rerio
 si:ch73-368j24.11ENSDARG00000105430Danio rerio
 si:ch73-368j24.12ENSDARG00000105502Danio rerio
 si:ch73-36p18.1ENSDARG00000115766Danio rerio
 si:dkey-108k21.10ENSDARG00000075508Danio rerio
 si:dkey-108k21.14ENSDARG00000110841Danio rerio
 si:dkey-108k21.21ENSDARG00000091905Danio rerio
 si:dkey-23a13.17ENSDARG00000105328Danio rerio
 si:dkey-23a13.9ENSDARG00000105431Danio rerio
 si:dkey-261m9.12ENSDARG00000032637Danio rerio
 zgc:110216ENSDARG00000077456Danio rerio
 zgc:110425ENSDARG00000058479Danio rerio
 zgc:153405ENSDARG00000096992Danio rerio
 zgc:163061ENSDARG00000075538Danio rerio
 zgc:163061ENSDARG00000076766Danio rerio
 ENSGALG00000011747Gallus gallus
 HIST1H111RENSGALG00000011783Gallus gallus
 P08284ENSGALG00000031874Gallus gallus
 P08285ENSGALG00000037167Gallus gallus
 P08286ENSGALG00000031159Gallus gallus
 Hist1h1tENSMUSG00000036211Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P10412 / HIST1H1E / histone cluster 1 H1 family member eENSG0000016829855
P16401 / HIST1H1B / histone cluster 1 H1 family member bENSG0000018435753
P16402 / HIST1H1D / histone cluster 1 H1 family member dENSG0000012457551
P16403 / HIST1H1C / histone cluster 1 H1 family member cENSG0000018783751
Q02539 / HIST1H1A / histone cluster 1 H1 family member aENSG0000012461050


Protein motifs (from Interpro)
Interpro ID Name
 IPR005818  Linker histone H1/H5, domain H15
 IPR005819  Histone H5
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis TAS
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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