ENSGALG00000011783


Gallus gallus

Features
Gene ID: ENSGALG00000011783
  
Biological name :HIST1H111R
  
Synonyms : HIST1H111R / histone H1.11R
  
Possible biological names infered from orthology : Gm6970 / HIST1H1A / HIST1H1B / HIST1H1C / HIST1H1D / HIST1H1E / HIST1H1T / histone cluster 1, H1c / histone cluster 1 H1 family member a / histone cluster 1 H1 family member b / histone cluster 1 H1 family member c / histone cluster 1 H1 family member d / histone cluster 1 H1 family member e / histone cluster 1 H1 family member t / Histone H1.1 / Histone H1.3 / Histone H1.4 / Histone H1.5 / P10412 / P15864 / P16401 / P16402 / P16403 / P22492 / P43274 / P43275 / P43276 / P43277 / Q02539
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 48200667
Gene end: 48201409
  
Corresponding Affymetrix probe sets: GgaAffx.23667.1.A1_at (Chicken Array)   GgaAffx.23667.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019205
NCBI entrez gene - 427896     See in Manteia.
RefSeq - NM_001081703
RefSeq Peptide - NP_001075172
swissprot - F1NME1
Ensembl - ENSGALG00000011783
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 histh1lENSDARG00000035519Danio rerio
 si:ch1073-153i20.4ENSDARG00000105350Danio rerio
 si:ch1073-159d7.7ENSDARG00000074012Danio rerio
 si:ch211-103n10.5ENSDARG00000077504Danio rerio
 si:ch211-113a14.18ENSDARG00000051735Danio rerio
 si:ch211-113a14.24ENSDARG00000051718Danio rerio
 si:ch73-368j24.11ENSDARG00000105430Danio rerio
 si:ch73-368j24.12ENSDARG00000105502Danio rerio
 si:ch73-36p18.1ENSDARG00000115766Danio rerio
 si:dkey-108k21.10ENSDARG00000075508Danio rerio
 si:dkey-108k21.14ENSDARG00000110841Danio rerio
 si:dkey-108k21.21ENSDARG00000091905Danio rerio
 si:dkey-23a13.17ENSDARG00000105328Danio rerio
 si:dkey-23a13.9ENSDARG00000105431Danio rerio
 si:dkey-261m9.12ENSDARG00000032637Danio rerio
 zgc:110216ENSDARG00000077456Danio rerio
 zgc:110425ENSDARG00000058479Danio rerio
 zgc:153405ENSDARG00000096992Danio rerio
 zgc:163061ENSDARG00000075538Danio rerio
 zgc:163061ENSDARG00000076766Danio rerio
 P10412ENSG00000168298Homo sapiens
 P16401ENSG00000184357Homo sapiens
 P16402ENSG00000124575Homo sapiens
 P16403ENSG00000187837Homo sapiens
 P22492ENSG00000187475Homo sapiens
 Q02539ENSG00000124610Homo sapiens
 Gm6970ENSMUSG00000091230Mus musculus
 Hist1h1tENSMUSG00000036211Mus musculus
 P15864ENSMUSG00000036181Mus musculus
 P43274ENSMUSG00000051627Mus musculus
 P43275ENSMUSG00000049539Mus musculus
 P43276ENSMUSG00000058773Mus musculus
 P43277ENSMUSG00000052565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P08284 / HIST1H101 / Histone H1.01 / Q02539* / P16402* / P16401* / P15864* / P10412* / Gm6970* / P43277* / P43276* / P43275* / P43274* / P22492* / P16403* / HIST1H1B* / HIST1H1C* / HIST1H1...ENSGALG0000003187490
P08286 / HIST1H110 / Histone H1.10 / Q02539* / Gm6970* / P10412* / P15864* / P16401* / P16402* / P16403* / P22492* / P43274* / P43275* / P43276* / P43277* / HIST1H1A* / HIST1H1D* / HIST1H1...ENSGALG0000003115990
P08285 / HIST1H103 / Histone H1.03 / Q02539* / P16402* / P16401* / P15864* / P10412* / Gm6970* / P43277* / P43276* / P43275* / P43274* / P22492* / P16403* / HIST1H1B* / HIST1H1C* / HIST1H1...ENSGALG0000003716790
Gm6970* / Q02539* / P10412* / P15864* / P16401* / P16402* / P16403* / P22492* / P43274* / P43275* / P43276* / P43277* / HIST1H1T* / HIST1H1A* / HIST1H1B* / HIST1H1C* / HIST1H1D* / HIST1H1E*...ENSGALG0000001174788


Protein motifs (from Interpro)
Interpro ID Name
 IPR005818  Linker histone H1/H5, domain H15
 IPR005819  Histone H5
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
Activation of DNA fragmentation factor
Formation of Senescence-Associated Heterochromatin Foci (SAHF)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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