ENSG00000197157


Homo sapiens

Features
Gene ID: ENSG00000197157
  
Biological name :SND1
  
Synonyms : Q7KZF4 / SND1 / staphylococcal nuclease and tudor domain containing 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q32.1
Gene start: 127652180
Gene end: 128092609
  
Corresponding Affymetrix probe sets: 201622_at (Human Genome U133 Plus 2.0 Array)   210109_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000419327
Ensembl peptide - ENSP00000346762
NCBI entrez gene - 27044     See in Manteia.
OMIM - 602181
RefSeq - XM_017011987
RefSeq - NM_014390
RefSeq Peptide - NP_055205
swissprot - A0A140VK49
swissprot - Q7KZF4
swissprot - H7C597
Ensembl - ENSG00000197157
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snd1ENSDARG00000006766Danio rerio
 Snd1ENSMUSG00000001424Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002071  Thermonuclease active site
 IPR002999  Tudor domain
 IPR016071  Staphylococcal nuclease (SNase-like), OB-fold
 IPR016685  RNA-induced silencing complex, nuclease component Tudor-SN
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001649 osteoblast differentiation HDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006401 RNA catabolic process IBA
 biological_processGO:0016032 viral process IEA
 biological_processGO:0031047 gene silencing by RNA IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0016442 RISC complex IEA
 cellular_componentGO:0042470 melanosome IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0097433 dense body IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003712 transcription coregulator activity TAS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0004518 nuclease activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
Signaling by BRAF and RAF fusions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000197157 SND1 / Q7KZF4 / staphylococcal nuclease and tudor domain containing 1  / complex






 

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