ENSG00000197558


Homo sapiens

Features
Gene ID: ENSG00000197558
  
Biological name :SSPO
  
Synonyms : SCO-spondin / SSPO
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q36.1
Gene start: 149776042
Gene end: 149833979
  
Corresponding Affymetrix probe sets: 234349_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000485256
NCBI entrez gene - 23145     See in Manteia.
OMIM - 617356
RefSeq - NM_198455
RefSeq Peptide - NP_940857
swissprot - A0A096LNW2
Ensembl - ENSG00000197558
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scospondinENSDARG00000067859Danio rerio
 SSPOENSGALG00000033417Gallus gallus
 SspoENSMUSG00000029797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MUC5B / Q9HC84 / mucin 5B, oligomeric mucus/gel-formingENSG0000011798315
MUC5AC / P98088 / mucin 5AC, oligomeric mucus/gel-formingENSG0000021518215
VWF / P04275 / von Willebrand factorENSG0000011079913
OTOG / Q6ZRI0 / otogelinENSG0000018816212
MUC6 / Q6W4X9 / mucin 6, oligomeric mucus/gel-formingENSG0000018495610
OTOGL / Q3ZCN5 / otogelin likeENSG0000016589910
FCGBP / Fc fragment of IgG binding proteinENSG000002753959
ZAN / zonadhesin (gene/pseudogene)ENSG000001468398
TECTA / O75443 / tectorin alphaENSG000001099278


Protein motifs (from Interpro)
Interpro ID Name
 IPR000421  Coagulation factor 5/8 C-terminal domain
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001007  VWFC domain
 IPR001846  von Willebrand factor, type D domain
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR002919  Trypsin Inhibitor-like, cysteine rich domain
 IPR006207  Cystine knot, C-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR014853  Uncharacterised domain, cysteine-rich
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site
 IPR030119  SCO-spondin
 IPR036055  LDL receptor-like superfamily
 IPR036084  Serine protease inhibitor-like superfamily
 IPR036201  Pacifastin domain superfamily
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0030154 cell differentiation IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030414 peptidase inhibitor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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