ENSMUSG00000029797


Mus musculus

Features
Gene ID: ENSMUSG00000029797
  
Biological name :Sspo
  
Synonyms : Q8CG65 / SCO-spondin / Sspo
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: B2.3
Gene start: 48448229
Gene end: 48501250
  
Corresponding Affymetrix probe sets: 10537978 (MoGene1.0st)   1457887_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148570
Ensembl peptide - ENSMUSP00000047991
Ensembl peptide - ENSMUSP00000131401
Ensembl peptide - ENSMUSP00000139484
Ensembl peptide - ENSMUSP00000140642
NCBI entrez gene - 243369     See in Manteia.
MGI - MGI:2674311
RefSeq - XM_017321582
RefSeq - XM_017321576
RefSeq - XM_017321577
RefSeq - XM_017321578
RefSeq - XM_017321579
RefSeq - XM_017321580
RefSeq - XM_017321581
RefSeq - NM_173428
RefSeq - XM_006506068
RefSeq - XM_006506069
RefSeq - XM_006506070
RefSeq - XM_006506071
RefSeq - XM_017321574
RefSeq - XM_017321575
RefSeq Peptide - NP_775604
swissprot - E9Q0I4
swissprot - A0A1D5RLZ9
swissprot - A0A087WRI0
swissprot - A0A087WNT4
swissprot - Q8CG65
Ensembl - ENSMUSG00000029797
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scospondinENSDARG00000067859Danio rerio
 SSPOENSGALG00000033417Gallus gallus
 SSPOENSG00000197558Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zan / zonadhesin / zonadhesin (gene/pseudogene)*ENSMUSG0000007917313
Vwf / Von Willebrand factor / P04275*ENSMUSG0000000193013
Muc5ac / P98088* / mucin 5AC, oligomeric mucus/gel-forming*ENSMUSG0000003797413
Muc5b / Q9HC84* / mucin 5B, oligomeric mucus/gel-forming*ENSMUSG0000006610813
Otog / otogelin / Q6ZRI0*ENSMUSG0000000948711
Otogl / F7A4A7 / Otogelin-like protein / Q3ZCN5* / otogelin like*ENSMUSG0000009145510
Muc6 / mucin-6 / Q6W4X9* / mucin 6, oligomeric mucus/gel-forming*ENSMUSG000000481919
Fcgbp / Fc fragment of IgG binding protein*ENSMUSG000000477308
9530053A07Rik / RIKEN cDNA 9530053A07 gene / FCGBP* / Fc fragment of IgG binding protein*ENSMUSG000000787768
Tecta / O08523 / tectorin alpha / O75443*ENSMUSG000000377057


Protein motifs (from Interpro)
Interpro ID Name
 IPR000421  Coagulation factor 5/8 C-terminal domain
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001007  VWFC domain
 IPR001846  von Willebrand factor, type D domain
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR002919  Trypsin Inhibitor-like, cysteine rich domain
 IPR006207  Cystine knot, C-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR014853  Uncharacterised domain, cysteine-rich
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site
 IPR030119  SCO-spondin
 IPR036055  LDL receptor-like superfamily
 IPR036084  Serine protease inhibitor-like superfamily
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0010466 negative regulation of peptidase activity IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030414 peptidase inhibitor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr