ENSG00000198756


Homo sapiens

Features
Gene ID: ENSG00000198756
  
Biological name :COLGALT2
  
Synonyms : COLGALT2 / collagen beta(1-O)galactosyltransferase 2 / Q8IYK4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q25.3
Gene start: 183929854
Gene end: 184037729
  
Corresponding Affymetrix probe sets: 209883_at (Human Genome U133 Plus 2.0 Array)   237382_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000354960
Ensembl peptide - ENSP00000356490
Ensembl peptide - ENSP00000356491
NCBI entrez gene - 23127     See in Manteia.
OMIM - 617533
RefSeq - XM_017000751
RefSeq - NM_001303420
RefSeq - NM_001303421
RefSeq - NM_015101
RefSeq - XM_011509334
RefSeq - XM_011509335
RefSeq - XM_011509336
RefSeq - XM_011509337
RefSeq - XM_011509338
RefSeq - XM_017000750
RefSeq - XM_011509332
RefSeq Peptide - NP_001290350
RefSeq Peptide - NP_055916
RefSeq Peptide - NP_001290349
swissprot - Q5SXQ3
swissprot - Q5SXQ5
swissprot - Q8IYK4
Ensembl - ENSG00000198756
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 colgalt2ENSDARG00000014670Danio rerio
 si:ch211-13f8.2ENSDARG00000078299Danio rerio
 COLGALT2ENSGALG00000038320Gallus gallus
 Q6NVG7ENSMUSG00000032649Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8NBJ5 / COLGALT1 / collagen beta(1-O)galactosyltransferase 1ENSG0000013030964
CERCAM / Q5T4B2 / cerebral endothelial cell adhesion moleculeENSG0000016712350
PLOD2 / O00469 / procollagen-lysine,2-oxoglutarate 5-dioxygenase 2ENSG0000015295219
PLOD3 / O60568 / procollagen-lysine,2-oxoglutarate 5-dioxygenase 3ENSG0000010639719
PLOD1 / Q02809 / procollagen-lysine,2-oxoglutarate 5-dioxygenase 1ENSG0000008344418


Protein motifs (from Interpro)
Interpro ID Name
 IPR002654  Glycosyl transferase, family 25
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0050211 procollagen galactosyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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