ENSDARG00000014670


Danio rerio

Features
Gene ID: ENSDARG00000014670
  
Biological name :colgalt2
  
Synonyms : colgalt2 / collagen beta(1-O)galactosyltransferase 2
  
Possible biological names infered from orthology : Procollagen galactosyltransferase 2 / Q6NVG7 / Q8IYK4
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 19364568
Gene end: 19395110
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000013506
NCBI entrez gene - 100003546     See in Manteia.
RefSeq - NM_001130076
RefSeq Peptide - NP_001123548
swissprot - A9C3Q0
ZFIN ID - ZDB-GENE-070222-1
Ensembl - ENSDARG00000014670
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COLGALT2ENSGALG00000038320Gallus gallus
 Q8IYK4ENSG00000198756Homo sapiens
 Q6NVG7ENSMUSG00000032649Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-13f8.2 / Q8IYK4* / Q6NVG7* / COLGALT2* / Procollagen galactosyltransferase 2 * / collagen beta(1-O)galactosyltransferase 2*ENSDARG0000007829962
A5PMF6 / COLGALT1 / si:ch211-114l13.7 / Q8K297* / Q8NBJ5* / Procollagen galactosyltransferase 1 * / collagen beta(1-O)galactosyltransferase 1*ENSDARG0000005827060
colgalt1 / collagen beta(1-O)galactosyltransferase 1 / Q8K297* / Q8NBJ5* / Procollagen galactosyltransferase 1 *ENSDARG0000007397458
cercam / cerebral endothelial cell adhesion molecule / A3KGW5* / Q5T4B2* / Inactive glycosyltransferase 25 family member 3 *ENSDARG0000007904953
plod1a / procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a / PLOD1* / Q9R0E2* / Q02809* / procollagen-lysine,2-oxoglutarate 5-dioxygenase 1*ENSDARG0000005974616
plod2 / procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 / O00469* / Q9R0B9*ENSDARG0000001182116
plod3 / wu:fb72h05 / O60568* / Q9R0E1* / procollagen-lysine,2-oxoglutarate 5-dioxygenase 3*ENSDARG0000007631716


Protein motifs (from Interpro)
Interpro ID Name
 IPR002654  Glycosyl transferase, family 25
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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