ENSG00000198836


Homo sapiens

Features
Gene ID: ENSG00000198836
  
Biological name :OPA1
  
Synonyms : O60313 / OPA1 / OPA1, mitochondrial dynamin like GTPase
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q29
Gene start: 193593144
Gene end: 193697823
  
Corresponding Affymetrix probe sets: 212213_x_at (Human Genome U133 Plus 2.0 Array)   212214_at (Human Genome U133 Plus 2.0 Array)   214306_at (Human Genome U133 Plus 2.0 Array)   241027_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000398358
Ensembl peptide - ENSP00000354429
Ensembl peptide - ENSP00000354681
Ensembl peptide - ENSP00000354781
Ensembl peptide - ENSP00000355311
Ensembl peptide - ENSP00000355324
Ensembl peptide - ENSP00000376231
Ensembl peptide - ENSP00000376232
Ensembl peptide - ENSP00000376233
Ensembl peptide - ENSP00000399877
Ensembl peptide - ENSP00000409084
Ensembl peptide - ENSP00000411699
Ensembl peptide - ENSP00000493673
Ensembl peptide - ENSP00000493913
Ensembl peptide - ENSP00000493988
Ensembl peptide - ENSP00000494015
Ensembl peptide - ENSP00000494121
Ensembl peptide - ENSP00000494210
Ensembl peptide - ENSP00000494273
Ensembl peptide - ENSP00000494509
Ensembl peptide - ENSP00000494512
Ensembl peptide - ENSP00000494725
Ensembl peptide - ENSP00000494736
Ensembl peptide - ENSP00000495028
Ensembl peptide - ENSP00000495289
Ensembl peptide - ENSP00000495535
Ensembl peptide - ENSP00000495943
NCBI entrez gene - 4976     See in Manteia.
OMIM - 605290
RefSeq - NM_001354664
RefSeq - NM_015560
RefSeq - NM_130837
RefSeq - NM_130831
RefSeq - NM_130835
RefSeq - NM_130834
RefSeq - NM_130833
RefSeq - XM_017006500
RefSeq - NM_130832
RefSeq - NM_130836
RefSeq - NM_001354663
RefSeq Peptide - NP_570846
RefSeq Peptide - NP_570848
RefSeq Peptide - NP_570849
RefSeq Peptide - NP_570850
RefSeq Peptide - NP_001341592
RefSeq Peptide - NP_001341593
RefSeq Peptide - NP_056375
RefSeq Peptide - NP_570844
RefSeq Peptide - NP_570845
RefSeq Peptide - NP_570847
swissprot - A8MXB6
swissprot - O60313
swissprot - H7C3G2
swissprot - H7C321
swissprot - H7C141
swissprot - E5KLJ9
swissprot - C9JY58
swissprot - C9JMB8
Ensembl - ENSG00000198836
  
Related genetic diseases (OMIM): 616896 - ?Mitochondrial DNA depletion syndrome 14 (encephalocardiomyopathic type), 616896
  210000 - Behr syndrome, 210000
  165500 - Optic atrophy 1, 165500
  125250 - Optic atrophy plus syndrome, 125250
  606657 - {Glaucoma, normal tension, susceptibility to}, 606657
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 opa1ENSDARG00000070801Danio rerio
 OPA1ENSGALG00000007150Gallus gallus
 Opa1ENSMUSG00000038084Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001401  Dynamin, GTPase domain
 IPR022812  Dynamin superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030381  Dynamin-type guanine nucleotide-binding (G) domain
 IPR033047  Dynamin-like 120kDa protein, mitochondrial


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000002 mitochondrial genome maintenance IMP
 biological_processGO:0000266 mitochondrial fission TAS
 biological_processGO:0003374 dynamin family protein polymerization involved in mitochondrial fission IBA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007005 mitochondrion organization IMP
 biological_processGO:0007007 inner mitochondrial membrane organization IDA
 biological_processGO:0007568 aging IEA
 biological_processGO:0007601 visual perception IMP
 biological_processGO:0008053 mitochondrial fusion TAS
 biological_processGO:0010636 positive regulation of mitochondrial fusion IEA
 biological_processGO:0014042 positive regulation of neuron maturation IEA
 biological_processGO:0014850 response to muscle activity IEA
 biological_processGO:0019896 axonal transport of mitochondrion TAS
 biological_processGO:0031667 response to nutrient levels IEA
 biological_processGO:0036444 calcium import into the mitochondrion IEA
 biological_processGO:0042981 regulation of apoptotic process TAS
 biological_processGO:0043066 negative regulation of apoptotic process IDA
 biological_processGO:0046039 GTP metabolic process IDA
 biological_processGO:0048312 intracellular distribution of mitochondria IEA
 biological_processGO:0050896 response to stimulus IEA
 biological_processGO:0051259 protein complex oligomerization IDA
 biological_processGO:0051602 response to electrical stimulus IEA
 biological_processGO:0060041 retina development in camera-type eye IEA
 biological_processGO:0061003 positive regulation of dendritic spine morphogenesis IEA
 biological_processGO:0070584 mitochondrion morphogenesis IEA
 biological_processGO:0071333 cellular response to glucose stimulus IEA
 biological_processGO:0071456 cellular response to hypoxia IEA
 biological_processGO:0090102 cochlea development IEA
 biological_processGO:0090201 negative regulation of release of cytochrome c from mitochondria IMP
 biological_processGO:0090398 cellular senescence IDA
 biological_processGO:0097749 membrane tubulation IDA
 biological_processGO:1900006 positive regulation of dendrite development IEA
 biological_processGO:1900078 positive regulation of cellular response to insulin stimulus IEA
 biological_processGO:1902236 negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IGI
 biological_processGO:1905232 cellular response to L-glutamate IEA
 biological_processGO:2001275 positive regulation of glucose import in response to insulin stimulus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005741 mitochondrial outer membrane IDA
 cellular_componentGO:0005743 mitochondrial inner membrane ISS
 cellular_componentGO:0005758 mitochondrial intermembrane space ISS
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030061 mitochondrial crista IDA
 cellular_componentGO:0030425 dendrite ISS
 cellular_componentGO:0031314 extrinsic component of mitochondrial inner membrane IEA
 cellular_componentGO:0031966 mitochondrial membrane IEA
 cellular_componentGO:1904115 axon cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0000287 magnesium ion binding NAS
 molecular_functionGO:0003924 GTPase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0008017 microtubule binding IBA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019900 kinase binding IEA
 molecular_functionGO:0070300 phosphatidic acid binding IDA
 molecular_functionGO:1901612 cardiolipin binding IDA


Pathways (from Reactome)
Pathway description
Regulation of Apoptosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000408 Hearing loss, sensorineural, progressive 
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000505 Impaired vision 
Show

 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
Show

 HP:0000529 Progressive visual loss 
Show

 HP:0000546 Retinal degeneration 
Show

 HP:0000551 Abnormal color vision 
Show

 HP:0000552 Blue-yellow dyschromatopsia 
Show

 HP:0000576 Centrocecal scotoma 
Show

 HP:0000590 External ophthalmoplegia, progressive (PEO) 
Show

 HP:0000602 Ophthalmoplegia 
Show

 HP:0000603 Central scotoma 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000642 Red-green dyschromatopsia 
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000649 Abnormality of vision evoked potentials 
Show

 HP:0000650 Pattern visual evoked potentials show reduced amplitude 
Show

 HP:0000666 Nystagmus, horizontal 
Show

 HP:0000762 Decreased nerve conduction velocities 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
Show

 HP:0001270 Motor retardation 
Show

 HP:0001272 Cerebellar atrophy 
Show

 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
Show

 HP:0001310 Dysmetria 
Show

 HP:0001315 Reduced reflexes 
Show

 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
Show

 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
Show

 HP:0001612 Weak cry 
Show

 HP:0001623 breech presentation 
Show

 HP:0001639 Hypertrophic cardiomyopathy 
Show

 HP:0001771 Achilles tendon contractures 
Show

 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
Show

 HP:0002179 Opisthotonus 
Show

 HP:0002191 Spasticity, progressive 
Show

 HP:0003089 Hamstring contractures 
Show

 HP:0003198 Myopathy 
Show

 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
Show

 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
Show

 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
Show

 HP:0003587 Insidious onset 
Show

 HP:0003676 Progressive disorder 
Show

 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
Show

 HP:0003812 Phenotypic variability 
Show

 HP:0003829 Incomplete penetrance 
Show

 HP:0006366 Adductor longus contractures 
Show

 HP:0006958 Abnormal auditory evoked potentials "An abnormality of the auditory evoked potentials, which are used to trace the signal generated by a sound, from the cochlear nerve, through the lateral lemniscus, to the medial geniculate nucleus, and to the cortex." [HPO:curators]
Show

 HP:0007328 Decreased pain sensation "Reduced ability to perceive painful stimuli." [HPO:curators]
Show

 HP:0007663 Decreased central vision 
Show

 HP:0008872 Feeding problems in infancy 
Show

 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
Show

 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
Show

 HP:0011410 Caesarian section 
Show

 HP:0012736 Profound global developmental delay "A profound delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000162600 OMA1 / Q96E52 / OMA1 zinc metallopeptidase  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr