ENSG00000204618


Homo sapiens

Features
Gene ID: ENSG00000204618
  
Biological name :RNF39
  
Synonyms : Q9H2S5 / ring finger protein 39 / RNF39
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p22.1
Gene start: 30070266
Gene end: 30075887
  
Corresponding Affymetrix probe sets: 219916_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000365942
Ensembl peptide - ENSP00000244360
NCBI entrez gene - 80352     See in Manteia.
OMIM - 607524
RefSeq - XM_017011325
RefSeq - NM_025236
RefSeq - NM_170769
RefSeq Peptide - NP_079512
RefSeq Peptide - NP_739575
swissprot - Q96QB5
swissprot - Q9H2S5
swissprot - A0A1U9X8G2
Ensembl - ENSG00000204618
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-114c12.5ENSDARG00000092931Danio rerio
 si:ch211-120g10.1ENSDARG00000090930Danio rerio
 si:dkey-18p12.4ENSDARG00000079703Danio rerio
 si:dkey-219e21.2ENSDARG00000096739Danio rerio
 zgc:194990ENSDARG00000069407Danio rerio
 ENSGALG00000037648Gallus gallus
 ENSGALG00000000123Gallus gallus
 ENSGALG00000041207Gallus gallus
 TRIM39.1ENSGALG00000038209Gallus gallus
 Rnf39ENSMUSG00000036492Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RFPL2 / O75678 / ret finger protein like 2ENSG0000012825322
RFPL1 / O75677 / ret finger protein like 1ENSG0000012825020
RFPL3 / O75679 / ret finger protein like 3ENSG0000012827620
F8VTS6 / RFPL4AL1 / ret finger protein like 4A like 1ENSG0000022929218
A6NLU0 / RFPL4A / ret finger protein like 4AENSG0000022363818
Q6ZWI9 / RFPL4B / ret finger protein like 4BENSG0000025125816
AL365214.3ENSG000002816137


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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