ENSDARG00000069407


Danio rerio

Features
Gene ID: ENSDARG00000069407
  
Biological name :zgc:194990
  
Synonyms : zgc:194990
  
Possible biological names infered from orthology : Q9H2S5 / ring finger protein 39 / RNF39
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 13161680
Gene end: 13184989
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000091764
Ensembl peptide - ENSDARP00000112936
NCBI entrez gene - 568410     See in Manteia.
RefSeq - NM_001130790
RefSeq Peptide - NP_001124262
swissprot - F1QIK4
ZFIN ID - ZDB-GENE-081022-171
Ensembl - ENSDARG00000069407
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037648Gallus gallus
 ENSGALG00000041207Gallus gallus
 ENSGALG00000000123Gallus gallus
 TRIM39.1ENSGALG00000038209Gallus gallus
 RNF39ENSG00000204618Homo sapiens
 Rnf39ENSMUSG00000036492Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-120g10.1 / RNF39* / Q9H2S5* / ring finger protein 39*ENSDARG0000009093055
si:dkey-18p12.4 / RNF39* / Q9H2S5* / ring finger protein 39*ENSDARG0000007970331
si:dkey-219e21.2 / RNF39* / Q9H2S5* / ring finger protein 39*ENSDARG0000009673929
zgc:173581ENSDARG0000010090926
btr18 / bloodthirsty-related gene family, member 18ENSDARG0000010361826
bty / btr25 / bloodthirsty-related gene family, member 25ENSDARG0000010201826
btr22 / bloodthirsty-related gene family, member 22ENSDARG0000010053926
si:ch211-114c12.5 / RNF39* / Q9H2S5* / ring finger protein 39*ENSDARG0000009293126
btr21 / bloodthirsty-related gene family, member 21ENSDARG0000010045026
btr06 / bloodthirsty-related gene family, member 6ENSDARG0000005418425
btr23 / bloodthirsty-related gene family, member 23ENSDARG0000009950925
si:ch211-216p19.6ENSDARG0000002790725
btr29 / bloodthirsty-related gene family, member 29ENSDARG0000009913825
btr24 / bloodthirsty-related gene family, member 24ENSDARG0000010214325
btr30 / bloodthirsty-related gene family, member 30ENSDARG0000010259125
btr26 / bloodthirsty-related gene family, member 26ENSDARG0000010524125
btr20 / bloodthirsty-related gene family, member 20ENSDARG0000010299224
btr12 / bloodthirsty-related gene family, member 12ENSDARG0000005180924
btr32 / bloodthirsty-related gene family, member 32ENSDARG0000005394024
btr19 / btr24 / bloodthirsty-related gene family, member 19ENSDARG0000010528324


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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