ENSGALG00000038209


Gallus gallus

Features
Gene ID: ENSGALG00000038209
  
Biological name :TRIM39.1
  
Synonyms : TRIM39.1
  
Possible biological names infered from orthology : Q9H2S5 / ring finger protein 39 / RNF39
  
Species: Gallus gallus
  
Chr. number: 16
Strand: 1
Band:
Gene start: 169039
Gene end: 173420
  
Corresponding Affymetrix probe sets: GgaAffx.82.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053778
NCBI entrez gene - 101747534     See in Manteia.
RefSeq - NM_001312883
RefSeq Peptide - NP_001299812
swissprot - A0A1D5PLQ8
Ensembl - ENSGALG00000038209
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-114c12.5ENSDARG00000092931Danio rerio
 si:ch211-120g10.1ENSDARG00000090930Danio rerio
 si:dkey-18p12.4ENSDARG00000079703Danio rerio
 si:dkey-219e21.2ENSDARG00000096739Danio rerio
 zgc:194990ENSDARG00000069407Danio rerio
 RNF39ENSG00000204618Homo sapiens
 Rnf39ENSMUSG00000036492Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF39* / Q9H2S5* / ring finger protein 39*ENSGALG0000003764829
RNF39* / Q9H2S5* / ring finger protein 39*ENSGALG0000000012327
RNF39* / Q9H2S5* / ring finger protein 39*ENSGALG0000004120725


Protein motifs (from Interpro)
Interpro ID Name
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr