ENSDARG00000079703


Danio rerio

Features
Gene ID: ENSDARG00000079703
  
Biological name :si:dkey-18p12.4
  
Synonyms : si:dkey-18p12.4
  
Possible biological names infered from orthology : Q9H2S5 / ring finger protein 39 / RNF39
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 30387916
Gene end: 30392745
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100217
NCBI entrez gene - 794946     See in Manteia.
RefSeq - NM_001122707
RefSeq Peptide - NP_001116179
swissprot - B0S6Z7
ZFIN ID - ZDB-GENE-070912-408
Ensembl - ENSDARG00000079703
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037648Gallus gallus
 ENSGALG00000041207Gallus gallus
 ENSGALG00000000123Gallus gallus
 TRIM39.1ENSGALG00000038209Gallus gallus
 RNF39ENSG00000204618Homo sapiens
 Rnf39ENSMUSG00000036492Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:194990 / RNF39* / Q9H2S5* / ring finger protein 39*ENSDARG0000006940730
si:ch211-120g10.1 / RNF39* / Q9H2S5* / ring finger protein 39*ENSDARG0000009093029
si:ch211-114c12.5 / RNF39* / Q9H2S5* / ring finger protein 39*ENSDARG0000009293126
si:dkey-219e21.2 / RNF39* / Q9H2S5* / ring finger protein 39*ENSDARG0000009673925
btr12 / bloodthirsty-related gene family, member 12ENSDARG0000005180922
btr24 / bloodthirsty-related gene family, member 24ENSDARG0000010214322
btr20 / bloodthirsty-related gene family, member 20ENSDARG0000010299222
btr22 / bloodthirsty-related gene family, member 22ENSDARG0000010053922
btr18 / bloodthirsty-related gene family, member 18ENSDARG0000010361822
btr21 / bloodthirsty-related gene family, member 21ENSDARG0000010045022
btr26 / bloodthirsty-related gene family, member 26ENSDARG0000010524122
btr30 / bloodthirsty-related gene family, member 30ENSDARG0000010259121
si:ch211-216p19.6ENSDARG0000002790721
btr23 / bloodthirsty-related gene family, member 23ENSDARG0000009950921
zgc:173581ENSDARG0000010090921
btr06 / bloodthirsty-related gene family, member 6ENSDARG0000005418421
bty / btr25 / bloodthirsty-related gene family, member 25ENSDARG0000010201821
btr04 / bloodthirsty-related gene family, member 4ENSDARG0000006096221
btr21 / si:ch211-247l8.10 / bloodthirsty-related gene family, member 21ENSDARG0000005832921
btr04 / si:ch211-247l8.8ENSDARG0000009511321


Protein motifs (from Interpro)
Interpro ID Name
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR014710  RmlC-like jelly roll fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr