ENSG00000241343


Homo sapiens

Features
Gene ID: ENSG00000241343
  
Biological name :RPL36A
  
Synonyms : P83881 / ribosomal protein L36a / RPL36A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: q22.1
Gene start: 101390824
Gene end: 101396154
  
Corresponding Affymetrix probe sets: 201406_at (Human Genome U133 Plus 2.0 Array)   243201_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000397659
Ensembl peptide - ENSP00000473451
Ensembl peptide - ENSP00000361940
Ensembl peptide - ENSP00000483017
Ensembl peptide - ENSP00000404375
Ensembl peptide - ENSP00000446503
NCBI entrez gene - 6173     See in Manteia.
OMIM - 300902
RefSeq - NM_021029
RefSeq Peptide - NP_066357
swissprot - H7BY91
swissprot - J3KQN4
swissprot - H0Y5B4
swissprot - P83881
swissprot - R4GN19
Ensembl - ENSG00000241343
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P61485ENSDARG00000058105Danio rerio
 ENSGALG00000004952Gallus gallus
 P83882ENSMUSG00000079435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q969Q0 / RPL36AL / ribosomal protein L36a likeENSG0000016550274
RPL36A-HNRNPH2 / RPL36A-HNRNPH2 readthroughENSG0000025752970


Protein motifs (from Interpro)
Interpro ID Name
 IPR000552  Ribosomal protein L44e
 IPR011332  Zinc-binding ribosomal protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0002181 cytoplasmic translation IC
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0019083 viral transcription TAS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IDA
 cellular_componentGO:0042788 polysomal ribosome IDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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