ENSGALG00000004952


Gallus gallus

Features
Gene ID: ENSGALG00000004952
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : 60S ribosomal protein L36a / Gm6525 / P83881 / P83882 / Q969Q0 / ribosomal protein L36a / ribosomal protein L36a like / ribosomal protein L36A, pseudogene 1 / RPL36A / RPL36A-HNRNPH2 / RPL36A-HNRNPH2 readthrough / RPL36AL / Rpl36a-ps1
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 2040343
Gene end: 2042413
  
Corresponding Affymetrix probe sets: Gga.4542.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007927
Ensembl peptide - ENSGALP00000063984
Ensembl peptide - ENSGALP00000045771
NCBI entrez gene - 100859914     See in Manteia.
RefSeq - XM_003641094
swissprot - A0A1L1RYQ8
swissprot - A0A1D5NZF3
swissprot - F1NIK4
Ensembl - ENSGALG00000004952
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P61485ENSDARG00000058105Danio rerio
 P83881ENSG00000241343Homo sapiens
 Q969Q0ENSG00000165502Homo sapiens
 RPL36A-HNRNPH2ENSG00000257529Homo sapiens
 Gm6525ENSMUSG00000104043Mus musculus
 P83882ENSMUSG00000079435Mus musculus
 P83882ENSMUSG00000049751Mus musculus
 Rpl36a-ps1ENSMUSG00000060377Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000552  Ribosomal protein L44e
 IPR011332  Zinc-binding ribosomal protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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