ENSMUSG00000079435


Mus musculus

Features
Gene ID: ENSMUSG00000079435
  
Biological name :Rpl36a
  
Synonyms : 60S ribosomal protein L36a / P83882 / Rpl36a
  
Possible biological names infered from orthology : P83881 / Q969Q0 / ribosomal protein L36a / ribosomal protein L36a like / RPL36AL
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: E3
Gene start: 134585654
Gene end: 134588062
  
Corresponding Affymetrix probe sets: 10421972 (MoGene1.0st)   10496735 (MoGene1.0st)   10601755 (MoGene1.0st)   1416807_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000126110
Ensembl peptide - ENSMUSP00000108837
NCBI entrez gene - 19982     See in Manteia.
MGI - MGI:1201789
RefSeq - NM_019865
RefSeq Peptide - NP_063918
swissprot - E9Q131
swissprot - P83882
swissprot - Q5M9P1
Ensembl - ENSMUSG00000079435
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P61485ENSDARG00000058105Danio rerio
 ENSGALG00000004952Gallus gallus
 P83881ENSG00000241343Homo sapiens
 Q969Q0ENSG00000165502Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P83882 / Rpl36al / ribosomal protein L36A-likeENSMUSG00000049751100
Rpl36a-ps1 / ribosomal protein L36A, pseudogene 1ENSMUSG0000006037796
Gm6525ENSMUSG0000010404393


Protein motifs (from Interpro)
Interpro ID Name
 IPR000552  Ribosomal protein L44e
 IPR011332  Zinc-binding ribosomal protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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