ENSG00000284770


Homo sapiens

Features
Gene ID: ENSG00000284770
  
Biological name :TBCE
  
Synonyms : Q15813 / TBCE / tubulin folding cofactor E
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q42.3
Gene start: 235367360
Gene end: 235452443
  
Corresponding Affymetrix probe sets: 203714_s_at (Human Genome U133 Plus 2.0 Array)   203715_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000494232
Ensembl peptide - ENSP00000495928
Ensembl peptide - ENSP00000495953
Ensembl peptide - ENSP00000495964
Ensembl peptide - ENSP00000496033
Ensembl peptide - ENSP00000496103
Ensembl peptide - ENSP00000496322
Ensembl peptide - ENSP00000496408
Ensembl peptide - ENSP00000496612
Ensembl peptide - ENSP00000496773
Ensembl peptide - ENSP00000355560
Ensembl peptide - ENSP00000384571
Ensembl peptide - ENSP00000439170
Ensembl peptide - ENSP00000493539
Ensembl peptide - ENSP00000493552
Ensembl peptide - ENSP00000493737
Ensembl peptide - ENSP00000493806
Ensembl peptide - ENSP00000494026
Ensembl peptide - ENSP00000494102
Ensembl peptide - ENSP00000494208
Ensembl peptide - ENSP00000494291
Ensembl peptide - ENSP00000494541
Ensembl peptide - ENSP00000494646
Ensembl peptide - ENSP00000494755
Ensembl peptide - ENSP00000494796
Ensembl peptide - ENSP00000494801
Ensembl peptide - ENSP00000494980
Ensembl peptide - ENSP00000495007
Ensembl peptide - ENSP00000495024
Ensembl peptide - ENSP00000495125
Ensembl peptide - ENSP00000495257
Ensembl peptide - ENSP00000495295
Ensembl peptide - ENSP00000495319
Ensembl peptide - ENSP00000495425
Ensembl peptide - ENSP00000495475
Ensembl peptide - ENSP00000495738
Ensembl peptide - ENSP00000495831
Ensembl peptide - ENSP00000495910
Ensembl peptide - ENSP00000495916
NCBI entrez gene - 6905     See in Manteia.
OMIM - 604934
RefSeq - NM_001079515
RefSeq - NM_001287801
RefSeq - NM_003193
RefSeq Peptide - NP_001072983
RefSeq Peptide - NP_001274730
RefSeq Peptide - NP_003184
swissprot - Q15813
Ensembl - ENSG00000284770
  
Related genetic diseases (OMIM): 241410 - Hypoparathyroidism-retardation-dysmorphism syndrome, 241410
  244460 - Kenny-Caffey syndrome, type 1, 244460
  617207 - Encephalopathy, progressive, with amyotrophy and optic atrophy, 617207
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbceENSDARG00000099921Danio rerio
 ENSGALG00000013950Gallus gallus
 TbceENSMUSG00000039233Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBCE / tubulin folding cofactor EENSG0000028505391
TBCEL / Q5QJ74 / tubulin folding cofactor E likeENSG0000015411418
AP000646.1ENSG0000028550915


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR000938  CAP Gly-rich domain
 IPR001931  Ribosomal protein S21e
 IPR029071  Ubiquitin-like domain superfamily
 IPR032675  Leucine-rich repeat domain superfamily
 IPR036859  CAP Gly-rich domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IMP
 biological_processGO:0006412 translation IEA
 biological_processGO:0006457 protein folding TAS
 biological_processGO:0007023 post-chaperonin tubulin folding pathway IDA
 biological_processGO:0007052 mitotic spindle organization IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule TAS
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0051087 chaperone binding TAS


Pathways (from Reactome)
Pathway description
Post-chaperonin tubulin folding pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000193 Bifid uvula "A split or cleft uvula." [HPO:curators]
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 HP:0000233 Thin vermillion border 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000270 Delayed closure of fontanelles "Infants normally have two fontanels at birth, the diamond-shaped anterior fontanelle at the junction of the coronal and sagittal sutures, and the posterior fontanelle at the intersection of the occipital and parietal bones. The posterior fontanelle usually closes by the 8th week of life, and the anterior fontanel closes by the 18th month of life on average. This term applies if there is delay of closure of the fontanelles beyond the normal age." [HPO:curators]
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 HP:0000293 Full cheeks 
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 HP:0000316 Hypertelorism 
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000444 Beaked nose 
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 HP:0000483 Astigmatism 
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 HP:0000490 Deep set eyes 
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 HP:0000648 Optic atrophy 
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 HP:0000670 Carious teeth 
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 HP:0000682 Abnormality of dental enamel "An abnormality of the dental enamel, which is the external layer of the teeth, being a highly mineralized substance consisting primarily of hydroxylapatite." [HPO:curators]
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 HP:0000824 Growth hormone deficiency "Insufficient production of growth hormone, which is produced by the anterior pituitary gland." [HPO:curators]
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 HP:0000883 Thin ribs 
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 HP:0000890 Long clavicles 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001281 Tetany 
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 HP:0001298 Encephalopathy 
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 HP:0001476 Delayed closure of the anterior fontanelle "A delay in closure (ossification) of the anterior fontanelle, which generally undergoes closure around the 18th month of life." [HPO:curators]
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0001903 Anemia 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002199 Seizures due to hypocalcemia 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002718 Recurrent bacterial infections 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002901 Hypocalcemia "A level of blood calcium that is lower than normal." [HPO:curators]
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 HP:0002905 Hyperphosphatemia 
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 HP:0002917 Hypomagnesemia 
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 HP:0003100 Thin long bones 
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 HP:0003198 Myopathy 
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 HP:0003416 Spinal canal stenosis 
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 HP:0003472 Hypocalcemic tetany 
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 HP:0003477 Axonal neuropathy 
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 HP:0003508 Proportionate short stature "Short stature affecting the trunk and the limbs proportionately." [HPO:curators]
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 HP:0003561 Birth length <3rd percentile 
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 HP:0003593 Early onset 
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 HP:0003676 Progressive disorder 
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 HP:0004279 Hypoplastic hand 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004331 Decreased skull ossification "A reduction in the magnitude or amount of ossification of the skull." [HPO:curators]
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 HP:0005214 Intestinal obstruction 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005374 Cellular immunodeficiency 
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 HP:0005450 Calvarial osteosclerosis "An increase in bone density affecting the calvaria (roof of the skull)." [HPO:curators]
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 HP:0005686 Patchy osteosclerosis "Patchy (irregular) increase in bone density. This can take on many forms depending on severity and distribution as can be seen on x-rays." [HPO:curators]
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 HP:0005791 Cortical thickening of long bone diaphyses "Abnormal thickening of the cortex of the diaphyseal region of long bones." [HPO:curators]
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 HP:0006470 Thin diaphyses of long bones 
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 HP:0006645 Thin, long clavicles 
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 HP:0006829 Severe muscular hypotonia "A severe degree of muscular hypotonia characterized by markedly reduced muscle tone." [HPO:curators]
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 HP:0007269 Spinal muscular atrophy "Muscular weakness and atrophy related to loss of the motor neurons of the spinal cord and brainstem." [HPO:curators]
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 HP:0007957 Variable degree of corneal opacities 
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 HP:0008056 Aplasia/Hypoplasia affecting the eye 
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 HP:0008198 Congenital hypoparathyroidism 
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 HP:0008572 External ear malformation 
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 HP:0008736 Hypoplasia of penis 
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 HP:0008846 Severe intrauterine growth retardation 
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 HP:0008897 Growth retardation, progressive 
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
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 HP:0100254 Stenosis of the medullary cavity of the long bones 
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 HP:0200055 Small hands 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000141556 TBCD / Q9BTW9 / tubulin folding cofactor D  / complex / reaction
 ENSG00000105254 TBCB / Q99426 / tubulin folding cofactor B  / reaction
 ENSG00000124659 TBCC / Q15814 / tubulin folding cofactor C  / reaction / complex






 

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