ENSGALG00000000401


Gallus gallus

Features
Gene ID: ENSGALG00000000401
  
Biological name :RBM15
  
Synonyms : RBM15 / RNA binding motif protein 15
  
Possible biological names infered from orthology : Q96T37
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 1389270
Gene end: 1392137
  
Corresponding Affymetrix probe sets: Gga.6563.1.A1_at (Chicken Array)   GgaAffx.257.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000545
NCBI entrez gene - 100859595     See in Manteia.
RefSeq - XM_015299147
swissprot - F1NRZ4
Ensembl - ENSGALG00000000401
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm15ENSDARG00000073847Danio rerio
 RBM15ENSG00000162775Homo sapiens
 Rbm15ENSMUSG00000048109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPEN / spen family transcriptional repressor / Q96T58* / spen family transcription repressor*ENSGALG0000003693225
Q6PHZ5* / Q8NDT2* / RBM15B* / RNA binding motif protein 15B*ENSGALG0000000237211


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR010912  Spen paralogue/orthologue C-terminal, metazoa
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR016194  SPOC-like, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0001569 branching involved in blood vessel morphogenesis IEA
 biological_processGO:0007221 positive regulation of transcription of Notch receptor target IEA
 biological_processGO:0045638 negative regulation of myeloid cell differentiation IEA
 biological_processGO:0048536 spleen development IEA
 biological_processGO:0060412 ventricular septum morphogenesis IEA
 biological_processGO:0060674 placenta blood vessel development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003676 nucleic acid binding IBA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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