ENSDARG00000073847


Danio rerio

Features
Gene ID: ENSDARG00000073847
  
Biological name :rbm15
  
Synonyms : rbm15 / RNA binding motif protein 15
  
Possible biological names infered from orthology : Q96T37
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 24788499
Gene end: 24791060
  
Corresponding Affymetrix probe sets: Dr.15490.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000100758
NCBI entrez gene - 798517     See in Manteia.
swissprot - F1RCY7
ZFIN ID - ZDB-GENE-041008-192
Ensembl - ENSDARG00000073847
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBM15ENSGALG00000000401Gallus gallus
 RBM15ENSG00000162775Homo sapiens
 Rbm15ENSMUSG00000048109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rbm15b / RNA binding motif protein 15B / Q6PHZ5* / Q8NDT2*ENSDARG0000007896642
spen / spen family transcriptional repressor / Q96T58* / spen family transcription repressor*ENSDARG0000007424527
si:ch1073-335m2.2 / SPEN* / Q96T58* / spen family transcriptional repressor*ENSDARG0000007433226


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR010912  Spen paralogue/orthologue C-terminal, metazoa
 IPR012921  Spen paralogue and orthologue SPOC, C-terminal
 IPR016194  SPOC-like, C-terminal domain superfamily
 IPR034470  RBM15, RNA recognition motif 1
 IPR034472  RBM15, RNA recognition motif 2
 IPR034473  RBM15, RNA recognition motif 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IBA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr