ENSGALG00000000638


Gallus gallus

Features
Gene ID: ENSGALG00000000638
  
Biological name :UTP4
  
Synonyms : UTP4 / UTP4, small subunit processome component
  
Possible biological names infered from orthology : Q8R2N2 / Q969X6
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 19158556
Gene end: 19163523
  
Corresponding Affymetrix probe sets: GgaAffx.408.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000000908
Ensembl peptide - ENSGALP00000062029
Ensembl peptide - ENSGALP00000059136
NCBI entrez gene - 769632     See in Manteia.
RefSeq - XM_001232919
RefSeq - XM_004944335
swissprot - E1C4A9
swissprot - A0A1L1RT90
swissprot - A0A1L1RK48
Ensembl - ENSGALG00000000638
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 utp4ENSDARG00000017675Danio rerio
 UTP4ENSG00000141076Homo sapiens
 Utp4ENSMUSG00000041438Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030490 maturation of SSU-rRNA IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0034455 t-UTP complex IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr