ENSMUSG00000041438


Mus musculus

Features
Gene ID: ENSMUSG00000041438
  
Biological name :Utp4
  
Synonyms : Q8R2N2 / Utp4 / UTP4 small subunit processome component
  
Possible biological names infered from orthology : Q969X6
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: D3
Gene start: 106893636
Gene end: 106923088
  
Corresponding Affymetrix probe sets: 10575102 (MoGene1.0st)   1423884_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000048377
Ensembl peptide - ENSMUSP00000148429
NCBI entrez gene - 21771     See in Manteia.
MGI - MGI:1096573
RefSeq - XM_006530842
RefSeq - NM_001358982
RefSeq - NM_011574
RefSeq Peptide - NP_001345911
RefSeq Peptide - NP_035704
swissprot - Q8R2N2
swissprot - A0A1D5RLM4
Ensembl - ENSMUSG00000041438
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 utp4ENSDARG00000017675Danio rerio
 UTP4ENSGALG00000000638Gallus gallus
 UTP4ENSG00000141076Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated ISO
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0030490 maturation of SSU-rRNA IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome ISO
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0034455 t-UTP complex IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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