ENSGALG00000000723


Gallus gallus

Features
Gene ID: ENSGALG00000000723
  
Biological name :STX12
  
Synonyms : STX12 / syntaxin 12
  
Possible biological names infered from orthology : Q86Y82 / Q9ER00
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 1440706
Gene end: 1453368
  
Corresponding Affymetrix probe sets: GgaAffx.460.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001024
NCBI entrez gene - 769300     See in Manteia.
RefSeq - XM_001232001
RefSeq - XM_015297580
swissprot - E1C319
Ensembl - ENSGALG00000000723
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stx12ENSDARG00000098813Danio rerio
 stx12lENSDARG00000044605Danio rerio
 STX12ENSG00000117758Homo sapiens
 Stx12ENSMUSG00000028879Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
STX7 / syntaxin 7 / O15400*ENSGALG0000003437450
TSNARE1 / t-SNARE domain containing 1 / Q96NA8*ENSGALG0000003701434


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0033344 cholesterol efflux IEA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0050821 protein stabilization IEA
 cellular_componentGO:0000407 phagophore assembly site IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031083 BLOC-1 complex IEA
 cellular_componentGO:0031201 SNARE complex IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0045121 membrane raft IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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