ENSDARG00000098813


Danio rerio

Features
Gene ID: ENSDARG00000098813
  
Biological name :stx12
  
Synonyms : stx12 / syntaxin 12
  
Possible biological names infered from orthology : Q86Y82 / Q9ER00
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 13905068
Gene end: 13923104
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136016
Ensembl peptide - ENSDARP00000131485
NCBI entrez gene - 415141     See in Manteia.
RefSeq - NM_001002051
RefSeq - XM_009294127
RefSeq - XM_009294128
RefSeq Peptide - NP_001002051
swissprot - A5PMJ7
ZFIN ID - ZDB-GENE-040625-11
Ensembl - ENSDARG00000098813
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX12ENSGALG00000000723Gallus gallus
 STX12ENSG00000117758Homo sapiens
 Stx12ENSMUSG00000028879Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stx12l / syntaxin 12, like / STX12* / Q9ER00* / Q86Y82* / syntaxin 12*ENSDARG0000004460570
stx7l / syntaxin 7-like / STX7* / O15400* / syntaxin 7*ENSDARG0000006920848
si:ch211-208k15.1 / Q96NA8* / TSNARE1* / t-SNARE domain containing 1*ENSDARG0000008865027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048278 vesicle docking IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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