ENSDARG00000044605


Danio rerio

Features
Gene ID: ENSDARG00000044605
  
Biological name :stx12l
  
Synonyms : stx12l / syntaxin 12, like
  
Possible biological names infered from orthology : Q86Y82 / Q9ER00 / STX12 / syntaxin 12
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 7626535
Gene end: 7641367
  
Corresponding Affymetrix probe sets: Dr.12472.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124627
Ensembl peptide - ENSDARP00000065513
Ensembl peptide - ENSDARP00000152172
NCBI entrez gene - 569124     See in Manteia.
RefSeq - XM_692489
swissprot - E7F0D3
ZFIN ID - ZDB-GENE-110715-1
Ensembl - ENSDARG00000044605
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STX12ENSGALG00000000723Gallus gallus
 STX12ENSG00000117758Homo sapiens
 Stx12ENSMUSG00000028879Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stx12 / syntaxin 12 / Q86Y82* / Q9ER00*ENSDARG0000009881370
stx7l / syntaxin 7-like / STX7* / O15400* / syntaxin 7*ENSDARG0000006920846
si:ch211-208k15.1 / Q96NA8* / TSNARE1* / t-SNARE domain containing 1*ENSDARG0000008865028


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0048278 vesicle docking IBA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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