ENSMUSG00000028879


Mus musculus

Features
Gene ID: ENSMUSG00000028879
  
Biological name :Stx12
  
Synonyms : Q9ER00 / Stx12 / Syntaxin-12
  
Possible biological names infered from orthology : Q86Y82
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.3
Gene start: 132853501
Gene end: 132884509
  
Corresponding Affymetrix probe sets: 10516982 (MoGene1.0st)   1435982_at (Mouse Genome 430 2.0 Array)   1448936_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030698
NCBI entrez gene - 100226     See in Manteia.
MGI - MGI:1931027
RefSeq - NM_133887
RefSeq Peptide - NP_598648
swissprot - Q9ER00
Ensembl - ENSMUSG00000028879
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stx12ENSDARG00000098813Danio rerio
 stx12lENSDARG00000044605Danio rerio
 STX12ENSGALG00000000723Gallus gallus
 STX12ENSG00000117758Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Stx7 / syntaxin 7 / O15400*ENSMUSG0000001999850


Protein motifs (from Interpro)
Interpro ID Name
 IPR000727  Target SNARE coiled-coil homology domain
 IPR006011  Syntaxin, N-terminal domain
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR010989  SNARE


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IEA
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0006906 vesicle fusion IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0033344 cholesterol efflux IEA
 biological_processGO:0048278 vesicle docking IBA
 biological_processGO:0050821 protein stabilization IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0000407 phagophore assembly site IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0031083 BLOC-1 complex IEA
 cellular_componentGO:0031201 SNARE complex IEA
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0045121 membrane raft IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 cellular_componentGO:0055038 recycling endosome membrane IEA
 molecular_functionGO:0000149 SNARE binding IBA
 molecular_functionGO:0005484 SNAP receptor activity IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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