ENSGALG00000001972


Gallus gallus

Features
Gene ID: ENSGALG00000001972
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : pre-mRNA processing factor 38B / Pre-mRNA-splicing factor 38B / PRPF38B / Q5VTL8 / Q80SY5
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 1252114
Gene end: 1256564
  
Corresponding Affymetrix probe sets: GgaAffx.25347.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003060
NCBI entrez gene - 768611     See in Manteia.
RefSeq - XM_001231649
swissprot - E1BVP9
Ensembl - ENSGALG00000001972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prpf38bENSDARG00000053101Danio rerio
 Q5VTL8ENSG00000134186Homo sapiens
 Q80SY5ENSMUSG00000027881Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5VTL8* / Q80SY5* / PRPF38B* / Pre-mRNA-splicing factor 38B * / pre-mRNA processing factor 38B*ENSGALG000000410973


Protein motifs (from Interpro)
Interpro ID Name
 IPR005037  Pre-mRNA-splicing factor 38


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0071011 precatalytic spliceosome IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr