ENSGALG00000002167


Gallus gallus

Features
Gene ID: ENSGALG00000002167
  
Biological name :PATL2
  
Synonyms : PAT1 homolog 2 / PATL2
  
Possible biological names infered from orthology : 2 / A2ARM1 / C9JE40
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 1248940
Gene end: 1255264
  
Corresponding Affymetrix probe sets: GgaAffx.1442.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003392
Ensembl peptide - ENSGALP00000053788
Ensembl peptide - ENSGALP00000050778
NCBI entrez gene - 415327     See in Manteia.
RefSeq - XM_015279080
RefSeq - XM_015279081
RefSeq - XM_015279082
swissprot - A0A1D5PLR8
swissprot - A0A1D5PDD3
swissprot - F1NXG9
Ensembl - ENSGALG00000002167
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-103b1.2ENSDARG00000089567Danio rerio
 PATL2ENSG00000229474Homo sapiens
 2 ENSMUSG00000027233Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019167  Topoisomerase II-associated protein PAT1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IBA
 biological_processGO:0010607 negative regulation of cytoplasmic mRNA processing body assembly IEA
 biological_processGO:0033962 cytoplasmic mRNA processing body assembly IBA
 cellular_componentGO:0000932 P-body IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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