ENSGALG00000002439


Gallus gallus

Features
Gene ID: ENSGALG00000002439
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : A6H8Y1 / B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB / BDP1 / Q571C7 / Transcription factor TFIIIB component B homolog
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 73045588
Gene end: 73100799
  
Corresponding Affymetrix probe sets: Gga.13065.1.S1_at (Chicken Array)   GgaAffx.1633.1.S1_at (Chicken Array)   GgaAffx.1661.1.S1_at (Chicken Array)   GgaAffx.1665.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042921
Ensembl peptide - ENSGALP00000003837
NCBI entrez gene - 427394     See in Manteia.
RefSeq - XM_424966
RefSeq - XM_004949631
RefSeq - XM_015280686
RefSeq - XM_004949630
swissprot - R4GL51
swissprot - E1C7N5
Ensembl - ENSGALG00000002439
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-204c21.1ENSDARG00000102375Danio rerio
 zgc:162472ENSDARG00000058630Danio rerio
 BDP1ENSG00000145734Homo sapiens
 Bdp1ENSMUSG00000049658Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR030701  Transcription factor TFIIIB component B""


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0006383 transcription by RNA polymerase III IEA
 biological_processGO:0070898 RNA polymerase III transcriptional preinitiation complex assembly IBA
 cellular_componentGO:0000126 transcription factor TFIIIB complex IBA
 molecular_functionGO:0001026 obsolete TFIIIB-type transcription factor activity IEA
 molecular_functionGO:0001156 TFIIIC-class transcription factor binding IBA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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