ENSGALG00000002624


Gallus gallus

Features
Gene ID: ENSGALG00000002624
  
Biological name :BMS1
  
Synonyms : BMS1 / ribosome biogenesis protein BMS1 homolog
  
Possible biological names infered from orthology : BMS1, ribosome biogenesis factor / Q14692
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 5071454
Gene end: 5092701
  
Corresponding Affymetrix probe sets: Gga.17060.1.S1_at (Chicken Array)   Gga.9610.1.S1_at (Chicken Array)   Gga.9610.1.S1_s_at (Chicken Array)   GgaAffx.25553.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004124
NCBI entrez gene - 423633     See in Manteia.
RefSeq - NM_001199520
RefSeq - XM_015288006
RefSeq - XM_015288007
RefSeq Peptide - NP_001186449
swissprot - F1NH69
Ensembl - ENSGALG00000002624
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bms1ENSDARG00000054154Danio rerio
 BMS1ENSG00000165733Homo sapiens
 Bms1ENSMUSG00000030138Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007034  Ribosome biogenesis protein BMS1/TSR1, C-terminal
 IPR012948  AARP2CN
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030387  Bms1/Tsr1-type G domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030686 90S preribosome IBA
 molecular_functionGO:0003924 GTPase activity IBA
 molecular_functionGO:0005525 GTP binding IBA
 molecular_functionGO:0034511 U3 snoRNA binding IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000015024 RCL1 / RNA terminal phosphate cyclase like 1 / Q9JJT0* / Q9Y2P8* / RNA 3-terminal phosphate cyclase-like protein *  / complex






 

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