ENSGALG00000003265


Gallus gallus

Features
Gene ID: ENSGALG00000003265
  
Biological name :PTP4A2
  
Synonyms : protein tyrosine phosphatase type IVA, member 2 / PTP4A2
  
Possible biological names infered from orthology : O70274 / Protein tyrosine phosphatase type IVA 2 / Q12974
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 5077320
Gene end: 5094760
  
Corresponding Affymetrix probe sets: Gga.10964.1.S1_s_at (Chicken Array)   Gga.5381.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057042
Ensembl peptide - ENSGALP00000059959
Ensembl peptide - ENSGALP00000059773
Ensembl peptide - ENSGALP00000005159
Ensembl peptide - ENSGALP00000056059
NCBI entrez gene - 419649     See in Manteia.
RefSeq - XM_015297846
RefSeq - XM_015297843
RefSeq - XM_015297844
RefSeq - XM_015297845
RefSeq - XM_015297841
RefSeq - XM_015297842
swissprot - A0A1D5PT19
swissprot - F1NLG3
swissprot - A0A1D5PVR6
Ensembl - ENSGALG00000003265
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptp4a2aENSDARG00000087443Danio rerio
 ptp4a2bENSDARG00000035676Danio rerio
 PTP4A2ENSG00000184007Homo sapiens
 O70274ENSMUSG00000028788Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTP4A1 / protein tyrosine phosphatase type IVA, member 1 / Q63739* / Q93096* / protein tyrosine phosphatase 4a1*ENSGALG0000001627184
PTP4A3 / protein tyrosine phosphatase type IVA, member 3 / O75365* / Q9D658* / Protein tyrosine phosphatase type IVA 3 *ENSGALG0000004096974


Protein motifs (from Interpro)
Interpro ID Name
 IPR000340  Dual specificity phosphatase, catalytic domain
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IBA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
RAB geranylgeranylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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