ENSGALG00000003318


Gallus gallus

Features
Gene ID: ENSGALG00000003318
  
Biological name :SNRNP35
  
Synonyms : small nuclear ribonucleoprotein U11/U12 subunit 35 / SNRNP35
  
Possible biological names infered from orthology : Q16560 / Q9D384 / U11/U12 small nuclear ribonucleoprotein 35 kDa protein
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 5023908
Gene end: 5025606
  
Corresponding Affymetrix probe sets: Gga.12461.1.S1_a_at (Chicken Array)   Gga.12461.3.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005248
NCBI entrez gene - 416823     See in Manteia.
RefSeq - NM_001277175
RefSeq Peptide - NP_001264104
swissprot - F1NJ85
Ensembl - ENSGALG00000003318
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q4KMD3ENSDARG00000099913Danio rerio
 Q16560ENSG00000184209Homo sapiens
 Q9D384ENSMUSG00000029402Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0000243 commitment complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0017069 snRNA binding IBA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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