ENSMUSG00000029402


Mus musculus

Features
Gene ID: ENSMUSG00000029402
  
Biological name :Snrnp35
  
Synonyms : Q9D384 / Snrnp35 / U11/U12 small nuclear ribonucleoprotein 35 kDa protein
  
Possible biological names infered from orthology : Q16560 / small nuclear ribonucleoprotein U11/U12 subunit 35
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: F
Gene start: 124483134
Gene end: 124491124
  
Corresponding Affymetrix probe sets: 10525741 (MoGene1.0st)   1430041_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121120
Ensembl peptide - ENSMUSP00000031349
Ensembl peptide - ENSMUSP00000107080
NCBI entrez gene - 76167     See in Manteia.
MGI - MGI:1923417
RefSeq - NM_029532
RefSeq - XM_006530494
RefSeq - XM_006530495
RefSeq Peptide - NP_083808
swissprot - D3YTL6
swissprot - Q9D384
Ensembl - ENSMUSG00000029402
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q4KMD3ENSDARG00000099913Danio rerio
 SNRNP35ENSGALG00000003318Gallus gallus
 Q16560ENSG00000184209Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q62376 / Snrnp70 / small nuclear ribonucleoprotein 70 (U1) / P08621* / small nuclear ribonucleoprotein U1 subunit 70*ENSMUSG0000006351141


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034146  snRNP35, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0000243 commitment complex IBA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005689 U12-type spliceosomal complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0071011 precatalytic spliceosome IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IBA
 molecular_functionGO:0017069 snRNA binding IBA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Minor Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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