ENSGALG00000003562


Gallus gallus

Features
Gene ID: ENSGALG00000003562
  
Biological name :NPTX2
  
Synonyms : neuronal pentraxin 2 / NPTX2
  
Possible biological names infered from orthology : O70340 / P47972
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 1225063
Gene end: 1235848
  
Corresponding Affymetrix probe sets: Gga.12904.1.S1_at (Chicken Array)   Gga.9307.1.S1_at (Chicken Array)   GgaAffx.25891.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005631
Ensembl peptide - ENSGALP00000048785
NCBI entrez gene - 416438     See in Manteia.
RefSeq - XM_414750
swissprot - A0A1D5P7U3
swissprot - E1C7S1
Ensembl - ENSGALG00000003562
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nptx2aENSDARG00000037794Danio rerio
 nptx2bENSDARG00000045164Danio rerio
 NPTX2ENSG00000106236Homo sapiens
 Nptx2ENSMUSG00000059991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NPTX1 / neuronal pentraxin 1 / Q15818* / Q62443*ENSGALG0000001741853
NPTXR / neuronal pentraxin receptor / Npcd* / O95502*ENSGALG0000004160432
PTX3 / pentraxin-related protein PTX3 precursor / P26022* / P48759* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSGALG0000002828420
CRP* / APCS* / Mptx1* / Mptx2* / P12246* / P02743* / P14847* / P02741* / C-reactive protein* / mucosal pentraxin 2* / serum amyloid P-component* / amyloid P component, serum*ENSGALG0000003988714
CRP / APCS* / Mptx1* / Mptx2* / P12246* / P02743* / P14847* / P02741* / C-reactive protein* / mucosal pentraxin 2* / serum amyloid P-component* / amyloid P component, serum*ENSGALG0000002213712
ENSGALG0000000239012


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR030476  Pentaxin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0008306 associative learning IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr