ENSDARG00000045164


Danio rerio

Features
Gene ID: ENSDARG00000045164
  
Biological name :nptx2b
  
Synonyms : neuronal pentraxin IIb / nptx2b
  
Possible biological names infered from orthology : neuronal pentraxin 2 / NPTX2 / O70340 / P47972
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 17889465
Gene end: 17897134
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000066406
NCBI entrez gene - 556906     See in Manteia.
RefSeq - NM_001171584
RefSeq Peptide - NP_001165055
swissprot - F1Q689
ZFIN ID - ZDB-GENE-110328-1
Ensembl - ENSDARG00000045164
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NPTX2ENSGALG00000003562Gallus gallus
 NPTX2ENSG00000106236Homo sapiens
 Nptx2ENSMUSG00000059991Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nptx2a / neuronal pentraxin 2a / NPTX2* / P47972* / neuronal pentraxin 2*ENSDARG0000003779473
nptx1l / neuronal pentraxin 1 like / NPTX1* / Q15818* / neuronal pentraxin 1*ENSDARG0000007467154
si:dkey-283b15.2ENSDARG0000004138245
si:dkey-14o18.2ENSDARG0000006299545
nptxrb / neuronal pentraxin receptor bENSDARG0000005337543
nptxra / neuronal pentraxin receptor aENSDARG0000004043039
ptx4 / pentraxin 4, long / Q96A99* / pentraxin 4* / pentraxin-4 isoform 2 *ENSDARG0000003807220
ptx3a / pentraxin 3, long a / PTX3* / P48759* / P26022* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSDARG0000006827517
ptx3b / pentraxin 3, long b / PTX3* / P48759* / P26022* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSDARG0000007951517
crp2 / crp3 / C-reactive protein 2ENSDARG0000004261315
crp1 / C-reactive protein 1ENSDARG0000007145414
crp2 / C-reactive protein 2ENSDARG0000005646213
crp / crp2 / c-reactive protein, pentraxin-relatedENSDARG0000005649813
crp6 / C-reactive protein 6ENSDARG0000007145712
crp7 / C-reactive protein 7ENSDARG0000007145612
si:ch211-270n8.1 / CRP* / APCS* / Mptx2* / Mptx1* / P12246* / P14847* / P02741* / P02743* / C-reactive protein* / mucosal pentraxin 2* / serum amyloid P-component* / amyloid P component, serum*ENSDARG0000004508912
si:ch211-234p6.9ENSDARG000000957307


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR030476  Pentaxin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042752 regulation of circadian rhythm IMP
 biological_processGO:0048168 regulation of neuronal synaptic plasticity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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