ENSDARG00000079515


Danio rerio

Features
Gene ID: ENSDARG00000079515
  
Biological name :ptx3b
  
Synonyms : pentraxin 3, long b / ptx3b
  
Possible biological names infered from orthology : P26022 / P48759 / pentraxin 3 / Pentraxin-related protein PTX3 / PTX3
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 36691771
Gene end: 36695144
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121080
swissprot - F1R7P9
ZFIN ID - ZDB-GENE-081104-385
Ensembl - ENSDARG00000079515
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTX3ENSGALG00000028284Gallus gallus
 PTX3ENSG00000163661Homo sapiens
 Ptx3ENSMUSG00000027832Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptx3a / pentraxin 3, long a / PTX3* / P48759* / P26022* / pentraxin 3* / Pentraxin-related protein PTX3 *ENSDARG0000006827542
si:dkey-283b15.2ENSDARG0000004138219
nptx1l / neuronal pentraxin 1 like / NPTX1* / Q15818* / neuronal pentraxin 1*ENSDARG0000007467119
si:dkey-14o18.2ENSDARG0000006299518
nptx2b / neuronal pentraxin IIb / NPTX2* / O70340* / P47972* / neuronal pentraxin 2*ENSDARG0000004516418
nptx2a / neuronal pentraxin 2a / NPTX2* / P47972* / neuronal pentraxin 2*ENSDARG0000003779417
nptxrb / neuronal pentraxin receptor bENSDARG0000005337517
nptxra / neuronal pentraxin receptor aENSDARG0000004043017
crp1 / C-reactive protein 1ENSDARG0000007145416
si:ch211-270n8.1 / CRP* / APCS* / Mptx2* / Mptx1* / P12246* / P14847* / P02741* / P02743* / C-reactive protein* / mucosal pentraxin 2* / serum amyloid P-component* / amyloid P component, serum*ENSDARG0000004508914
crp / crp2 / c-reactive protein, pentraxin-relatedENSDARG0000005649814
crp2 / C-reactive protein 2ENSDARG0000005646214
ptx4 / pentraxin 4, long / Q96A99* / pentraxin 4* / pentraxin-4 isoform 2 *ENSDARG0000003807214
crp6 / C-reactive protein 6ENSDARG0000007145714
crp7 / C-reactive protein 7ENSDARG0000007145614
crp2 / crp3 / C-reactive protein 2ENSDARG0000004261314
si:ch211-234p6.9ENSDARG000000957307


Protein motifs (from Interpro)
Interpro ID Name
 IPR001759  Pentraxin-related
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR030476  Pentaxin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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